Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29295 and AO353_29300 are separated by 206 nucleotides AO353_29300 and AO353_29305 are separated by 281 nucleotides
AO353_29295: AO353_29295 - aldehyde dehydrogenase, at 6,363,478 to 6,364,968
_29295
AO353_29300: AO353_29300 - gamma-glutamylputrescine synthetase, at 6,365,175 to 6,366,551
_29300
AO353_29305: AO353_29305 - Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) , at 6,366,833 to 6,367,594
_29305
Position (kb)
6365
6366
6367 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6364.208 kb on + strand, within AO353_29295 at 6364.208 kb on + strand, within AO353_29295 at 6364.208 kb on + strand, within AO353_29295 at 6364.208 kb on + strand, within AO353_29295 at 6364.208 kb on + strand, within AO353_29295 at 6364.208 kb on + strand, within AO353_29295 at 6364.209 kb on - strand, within AO353_29295 at 6364.209 kb on - strand, within AO353_29295 at 6364.209 kb on - strand, within AO353_29295 at 6364.209 kb on - strand, within AO353_29295 at 6364.209 kb on - strand, within AO353_29295 at 6364.210 kb on + strand, within AO353_29295 at 6364.210 kb on + strand at 6364.211 kb on - strand, within AO353_29295 at 6364.211 kb on - strand, within AO353_29295 at 6364.493 kb on - strand, within AO353_29295 at 6364.493 kb on - strand, within AO353_29295 at 6364.493 kb on - strand, within AO353_29295 at 6364.556 kb on + strand, within AO353_29295 at 6364.556 kb on + strand, within AO353_29295 at 6364.556 kb on + strand, within AO353_29295 at 6364.557 kb on - strand, within AO353_29295 at 6364.557 kb on - strand, within AO353_29295 at 6364.889 kb on + strand at 6364.889 kb on + strand at 6364.890 kb on - strand at 6364.925 kb on - strand at 6364.959 kb on + strand at 6364.959 kb on + strand at 6364.960 kb on - strand at 6364.992 kb on + strand at 6364.992 kb on + strand at 6364.992 kb on + strand at 6364.993 kb on - strand at 6364.993 kb on - strand at 6364.993 kb on - strand at 6364.993 kb on - strand at 6364.993 kb on - strand at 6365.019 kb on + strand at 6365.019 kb on + strand at 6365.019 kb on + strand at 6365.019 kb on + strand at 6365.020 kb on - strand at 6365.020 kb on - strand at 6365.020 kb on - strand at 6365.059 kb on + strand at 6365.059 kb on + strand at 6365.060 kb on - strand at 6365.105 kb on + strand at 6365.138 kb on + strand at 6365.139 kb on - strand at 6365.139 kb on - strand at 6365.139 kb on - strand at 6365.139 kb on - strand at 6365.139 kb on - strand at 6365.183 kb on + strand at 6365.184 kb on - strand at 6365.191 kb on + strand at 6365.192 kb on - strand at 6365.192 kb on - strand at 6365.192 kb on - strand at 6365.200 kb on + strand at 6365.200 kb on + strand at 6365.200 kb on + strand at 6365.201 kb on - strand at 6365.201 kb on - strand at 6365.201 kb on - strand at 6365.201 kb on - strand at 6365.201 kb on - strand at 6365.272 kb on + strand at 6365.273 kb on - strand at 6365.273 kb on - strand at 6365.287 kb on + strand at 6365.287 kb on + strand at 6365.287 kb on + strand at 6365.287 kb on + strand at 6365.287 kb on + strand at 6365.287 kb on + strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.288 kb on - strand at 6365.368 kb on + strand, within AO353_29300 at 6365.368 kb on + strand, within AO353_29300 at 6365.369 kb on - strand, within AO353_29300 at 6365.369 kb on - strand, within AO353_29300 at 6365.369 kb on - strand, within AO353_29300 at 6365.456 kb on - strand, within AO353_29300 at 6365.576 kb on - strand, within AO353_29300 at 6365.576 kb on - strand, within AO353_29300 at 6365.576 kb on - strand, within AO353_29300 at 6365.576 kb on - strand, within AO353_29300 at 6365.599 kb on + strand, within AO353_29300 at 6365.599 kb on + strand, within AO353_29300 at 6365.673 kb on + strand, within AO353_29300 at 6365.673 kb on + strand, within AO353_29300 at 6365.674 kb on - strand, within AO353_29300 at 6365.674 kb on - strand, within AO353_29300 at 6365.815 kb on + strand, within AO353_29300 at 6365.816 kb on - strand, within AO353_29300 at 6365.816 kb on - strand, within AO353_29300 at 6365.992 kb on + strand, within AO353_29300 at 6365.992 kb on + strand, within AO353_29300 at 6365.992 kb on + strand, within AO353_29300 at 6366.016 kb on + strand, within AO353_29300 at 6366.016 kb on + strand, within AO353_29300 at 6366.016 kb on + strand, within AO353_29300 at 6366.017 kb on - strand, within AO353_29300 at 6366.103 kb on + strand, within AO353_29300 at 6366.104 kb on - strand, within AO353_29300 at 6366.407 kb on + strand, within AO353_29300 at 6366.407 kb on + strand, within AO353_29300 at 6366.407 kb on + strand, within AO353_29300 at 6366.408 kb on - strand, within AO353_29300 at 6366.408 kb on - strand, within AO353_29300 at 6366.478 kb on + strand at 6366.478 kb on + strand at 6366.494 kb on - strand at 6366.560 kb on + strand at 6366.560 kb on + strand at 6366.560 kb on + strand at 6366.560 kb on + strand at 6366.560 kb on + strand at 6366.561 kb on - strand at 6366.561 kb on - strand at 6366.561 kb on - strand at 6366.563 kb on + strand at 6366.564 kb on - strand at 6366.570 kb on + strand at 6366.574 kb on + strand at 6366.650 kb on + strand at 6366.651 kb on - strand at 6366.651 kb on - strand at 6366.695 kb on - strand at 6366.767 kb on - strand at 6366.767 kb on - strand at 6366.828 kb on + strand at 6366.829 kb on - strand at 6366.914 kb on + strand, within AO353_29305 at 6366.914 kb on + strand, within AO353_29305 at 6366.914 kb on + strand, within AO353_29305 at 6366.914 kb on + strand, within AO353_29305 at 6366.914 kb on + strand, within AO353_29305 at 6366.914 kb on + strand, within AO353_29305 at 6366.915 kb on - strand, within AO353_29305 at 6366.915 kb on - strand, within AO353_29305 at 6366.915 kb on - strand, within AO353_29305 at 6366.915 kb on - strand, within AO353_29305 at 6366.915 kb on - strand, within AO353_29305 at 6366.978 kb on + strand, within AO353_29305 at 6366.979 kb on - strand, within AO353_29305 at 6367.286 kb on + strand, within AO353_29305 at 6367.286 kb on + strand, within AO353_29305 at 6367.286 kb on + strand, within AO353_29305 at 6367.526 kb on + strand at 6367.526 kb on + strand at 6367.527 kb on - strand at 6367.527 kb on - strand at 6367.534 kb on + strand at 6367.535 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 6,364,208 + AO353_29295 0.49 +0.5 6,364,208 + AO353_29295 0.49 +0.3 6,364,208 + AO353_29295 0.49 -0.4 6,364,208 + AO353_29295 0.49 -1.3 6,364,208 + AO353_29295 0.49 -0.7 6,364,208 + AO353_29295 0.49 +0.2 6,364,209 - AO353_29295 0.49 +0.3 6,364,209 - AO353_29295 0.49 +0.8 6,364,209 - AO353_29295 0.49 -0.5 6,364,209 - AO353_29295 0.49 -0.8 6,364,209 - AO353_29295 0.49 -0.7 6,364,210 + AO353_29295 0.49 -0.1 6,364,210 + +1.0 6,364,211 - AO353_29295 0.49 -2.0 6,364,211 - AO353_29295 0.49 +1.0 6,364,493 - AO353_29295 0.68 -1.3 6,364,493 - AO353_29295 0.68 -0.8 6,364,493 - AO353_29295 0.68 +0.2 6,364,556 + AO353_29295 0.72 -0.4 6,364,556 + AO353_29295 0.72 -0.7 6,364,556 + AO353_29295 0.72 -0.5 6,364,557 - AO353_29295 0.72 -0.3 6,364,557 - AO353_29295 0.72 -0.5 6,364,889 + -0.9 6,364,889 + -1.2 6,364,890 - -1.5 6,364,925 - +0.5 6,364,959 + -0.0 6,364,959 + -0.1 6,364,960 - +1.0 6,364,992 + +1.0 6,364,992 + +0.0 6,364,992 + -0.8 6,364,993 - +1.8 6,364,993 - -1.3 6,364,993 - -0.6 6,364,993 - +0.7 6,364,993 - +0.3 6,365,019 + -0.3 6,365,019 + -0.5 6,365,019 + +0.0 6,365,019 + +2.0 6,365,020 - +0.3 6,365,020 - -1.5 6,365,020 - +0.6 6,365,059 + -0.5 6,365,059 + +0.4 6,365,060 - +0.4 6,365,105 + -0.5 6,365,138 + -0.2 6,365,139 - +0.1 6,365,139 - +0.0 6,365,139 - +0.5 6,365,139 - +0.5 6,365,139 - -1.5 6,365,183 + -1.1 6,365,184 - -1.0 6,365,191 + -0.2 6,365,192 - +0.6 6,365,192 - +0.7 6,365,192 - +0.2 6,365,200 + +0.6 6,365,200 + -1.1 6,365,200 + -0.2 6,365,201 - -0.8 6,365,201 - -1.0 6,365,201 - +0.0 6,365,201 - -0.1 6,365,201 - +1.0 6,365,272 + +0.0 6,365,273 - -1.0 6,365,273 - +0.6 6,365,287 + -0.4 6,365,287 + +0.0 6,365,287 + -0.4 6,365,287 + -0.5 6,365,287 + -0.2 6,365,287 + -0.2 6,365,288 - +0.7 6,365,288 - -0.2 6,365,288 - -1.0 6,365,288 - -0.5 6,365,288 - -0.2 6,365,288 - -2.3 6,365,288 - +0.1 6,365,368 + AO353_29300 0.14 -1.0 6,365,368 + AO353_29300 0.14 +1.3 6,365,369 - AO353_29300 0.14 -0.6 6,365,369 - AO353_29300 0.14 +0.3 6,365,369 - AO353_29300 0.14 -0.4 6,365,456 - AO353_29300 0.20 +2.0 6,365,576 - AO353_29300 0.29 +0.2 6,365,576 - AO353_29300 0.29 -0.5 6,365,576 - AO353_29300 0.29 +0.6 6,365,576 - AO353_29300 0.29 +1.6 6,365,599 + AO353_29300 0.31 -0.3 6,365,599 + AO353_29300 0.31 -0.4 6,365,673 + AO353_29300 0.36 -0.6 6,365,673 + AO353_29300 0.36 -0.9 6,365,674 - AO353_29300 0.36 -0.5 6,365,674 - AO353_29300 0.36 +0.5 6,365,815 + AO353_29300 0.46 +0.5 6,365,816 - AO353_29300 0.47 -0.3 6,365,816 - AO353_29300 0.47 +2.0 6,365,992 + AO353_29300 0.59 -1.5 6,365,992 + AO353_29300 0.59 +0.7 6,365,992 + AO353_29300 0.59 +0.5 6,366,016 + AO353_29300 0.61 -1.9 6,366,016 + AO353_29300 0.61 -0.2 6,366,016 + AO353_29300 0.61 -0.4 6,366,017 - AO353_29300 0.61 +1.5 6,366,103 + AO353_29300 0.67 -0.7 6,366,104 - AO353_29300 0.67 -1.0 6,366,407 + AO353_29300 0.89 +1.0 6,366,407 + AO353_29300 0.89 -1.1 6,366,407 + AO353_29300 0.89 -0.3 6,366,408 - AO353_29300 0.90 -1.4 6,366,408 - AO353_29300 0.90 -0.4 6,366,478 + -1.3 6,366,478 + -0.3 6,366,494 - +0.9 6,366,560 + +1.2 6,366,560 + -0.2 6,366,560 + -0.8 6,366,560 + +1.0 6,366,560 + +0.8 6,366,561 - +0.0 6,366,561 - -0.2 6,366,561 - -0.8 6,366,563 + -1.3 6,366,564 - -2.0 6,366,570 + -0.1 6,366,574 + -2.3 6,366,650 + -0.8 6,366,651 - -0.5 6,366,651 - +0.3 6,366,695 - +0.0 6,366,767 - +0.8 6,366,767 - -0.5 6,366,828 + -0.5 6,366,829 - +0.2 6,366,914 + AO353_29305 0.11 +1.4 6,366,914 + AO353_29305 0.11 +0.0 6,366,914 + AO353_29305 0.11 -0.6 6,366,914 + AO353_29305 0.11 -1.3 6,366,914 + AO353_29305 0.11 +0.8 6,366,914 + AO353_29305 0.11 -0.2 6,366,915 - AO353_29305 0.11 -0.8 6,366,915 - AO353_29305 0.11 -1.3 6,366,915 - AO353_29305 0.11 -0.5 6,366,915 - AO353_29305 0.11 -2.1 6,366,915 - AO353_29305 0.11 -0.7 6,366,978 + AO353_29305 0.19 +1.0 6,366,979 - AO353_29305 0.19 +0.3 6,367,286 + AO353_29305 0.59 -1.5 6,367,286 + AO353_29305 0.59 -0.4 6,367,286 + AO353_29305 0.59 +1.0 6,367,526 + +2.6 6,367,526 + +0.2 6,367,527 - -1.0 6,367,527 - +0.5 6,367,534 + +0.8 6,367,535 - -0.2
Or see this region's nucleotide sequence