Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22050 and AO353_22055 are separated by 10 nucleotides AO353_22055 and AO353_22060 overlap by 7 nucleotides
AO353_22050: AO353_22050 - protease, at 4,828,746 to 4,829,741
_22050
AO353_22055: AO353_22055 - protease, at 4,829,752 to 4,830,642
_22055
AO353_22060: AO353_22060 - lipid carrier protein, at 4,830,636 to 4,831,103
_22060
Position (kb)
4829
4830
4831 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4828.784 kb on - strand at 4828.818 kb on + strand at 4828.819 kb on - strand at 4828.819 kb on - strand at 4828.929 kb on + strand, within AO353_22050 at 4828.930 kb on - strand, within AO353_22050 at 4829.050 kb on - strand, within AO353_22050 at 4829.130 kb on + strand, within AO353_22050 at 4829.131 kb on - strand, within AO353_22050 at 4829.131 kb on - strand, within AO353_22050 at 4829.131 kb on - strand, within AO353_22050 at 4829.131 kb on - strand, within AO353_22050 at 4829.191 kb on + strand, within AO353_22050 at 4829.192 kb on - strand, within AO353_22050 at 4829.192 kb on - strand, within AO353_22050 at 4829.286 kb on + strand, within AO353_22050 at 4829.286 kb on + strand, within AO353_22050 at 4829.286 kb on + strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.287 kb on - strand, within AO353_22050 at 4829.403 kb on + strand, within AO353_22050 at 4829.405 kb on + strand, within AO353_22050 at 4829.406 kb on - strand, within AO353_22050 at 4829.678 kb on - strand at 4829.678 kb on - strand at 4829.721 kb on + strand at 4829.722 kb on - strand at 4829.722 kb on - strand at 4829.782 kb on + strand at 4829.812 kb on + strand at 4829.812 kb on + strand at 4829.813 kb on - strand at 4829.848 kb on + strand, within AO353_22055 at 4829.848 kb on + strand, within AO353_22055 at 4829.848 kb on + strand, within AO353_22055 at 4829.849 kb on - strand, within AO353_22055 at 4829.849 kb on - strand, within AO353_22055 at 4829.921 kb on + strand, within AO353_22055 at 4829.921 kb on + strand, within AO353_22055 at 4830.109 kb on + strand, within AO353_22055 at 4830.109 kb on + strand at 4830.109 kb on + strand, within AO353_22055 at 4830.171 kb on - strand, within AO353_22055 at 4830.171 kb on - strand, within AO353_22055 at 4830.277 kb on + strand, within AO353_22055 at 4830.278 kb on - strand, within AO353_22055 at 4830.295 kb on - strand, within AO353_22055 at 4830.343 kb on - strand, within AO353_22055 at 4830.350 kb on - strand, within AO353_22055 at 4830.440 kb on + strand, within AO353_22055 at 4830.440 kb on + strand, within AO353_22055 at 4830.452 kb on - strand, within AO353_22055 at 4830.510 kb on + strand, within AO353_22055 at 4830.533 kb on - strand, within AO353_22055 at 4831.116 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.135 kb on - strand at 4831.135 kb on - strand at 4831.161 kb on - strand at 4831.184 kb on + strand at 4831.229 kb on - strand at 4831.229 kb on - strand at 4831.242 kb on + strand at 4831.420 kb on + strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,828,784 - -0.1 4,828,818 + +0.8 4,828,819 - -0.7 4,828,819 - +1.0 4,828,929 + AO353_22050 0.18 +0.3 4,828,930 - AO353_22050 0.18 +0.9 4,829,050 - AO353_22050 0.31 +1.0 4,829,130 + AO353_22050 0.39 +1.4 4,829,131 - AO353_22050 0.39 -0.1 4,829,131 - AO353_22050 0.39 +0.3 4,829,131 - AO353_22050 0.39 +0.6 4,829,131 - AO353_22050 0.39 +1.3 4,829,191 + AO353_22050 0.45 -1.3 4,829,192 - AO353_22050 0.45 +0.5 4,829,192 - AO353_22050 0.45 +1.3 4,829,286 + AO353_22050 0.54 +1.0 4,829,286 + AO353_22050 0.54 -1.1 4,829,286 + AO353_22050 0.54 +0.8 4,829,287 - AO353_22050 0.54 -0.6 4,829,287 - AO353_22050 0.54 +0.3 4,829,287 - AO353_22050 0.54 -0.6 4,829,287 - AO353_22050 0.54 +0.4 4,829,287 - AO353_22050 0.54 -1.0 4,829,287 - AO353_22050 0.54 +0.4 4,829,287 - AO353_22050 0.54 -0.4 4,829,403 + AO353_22050 0.66 +0.2 4,829,405 + AO353_22050 0.66 -0.3 4,829,406 - AO353_22050 0.66 -0.5 4,829,678 - -0.6 4,829,678 - -0.2 4,829,721 + +1.7 4,829,722 - -0.2 4,829,722 - +0.3 4,829,782 + +0.1 4,829,812 + +0.1 4,829,812 + -0.5 4,829,813 - -1.8 4,829,848 + AO353_22055 0.11 +0.6 4,829,848 + AO353_22055 0.11 -0.2 4,829,848 + AO353_22055 0.11 -0.3 4,829,849 - AO353_22055 0.11 -2.7 4,829,849 - AO353_22055 0.11 +0.5 4,829,921 + AO353_22055 0.19 -1.2 4,829,921 + AO353_22055 0.19 -0.6 4,830,109 + AO353_22055 0.40 -1.7 4,830,109 + -0.6 4,830,109 + AO353_22055 0.40 +0.6 4,830,171 - AO353_22055 0.47 -0.5 4,830,171 - AO353_22055 0.47 -1.6 4,830,277 + AO353_22055 0.59 +0.2 4,830,278 - AO353_22055 0.59 -1.5 4,830,295 - AO353_22055 0.61 -1.0 4,830,343 - AO353_22055 0.66 -0.6 4,830,350 - AO353_22055 0.67 -0.3 4,830,440 + AO353_22055 0.77 +0.1 4,830,440 + AO353_22055 0.77 +0.6 4,830,452 - AO353_22055 0.79 -0.3 4,830,510 + AO353_22055 0.85 +0.1 4,830,533 - AO353_22055 0.88 +0.2 4,831,116 - +2.0 4,831,131 - +0.4 4,831,131 - -0.4 4,831,131 - +0.3 4,831,131 - +0.7 4,831,131 - +1.3 4,831,131 - -1.4 4,831,131 - -0.5 4,831,131 - -0.1 4,831,135 - -1.5 4,831,135 - +0.6 4,831,161 - +0.7 4,831,184 + +0.6 4,831,229 - +0.2 4,831,229 - -0.6 4,831,242 + -0.0 4,831,420 + -0.3 4,831,421 - -2.3 4,831,421 - -0.8 4,831,421 - +0.3 4,831,478 - +0.8 4,831,478 - -0.4 4,831,478 - +0.1
Or see this region's nucleotide sequence