Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04360 and AO353_04365 are separated by 331 nucleotides AO353_04365 and AO353_04370 are separated by 145 nucleotides AO353_04370 and AO353_04375 are separated by 45 nucleotides
AO353_04360: AO353_04360 - protein-disulfide isomerase, at 940,719 to 941,450
_04360
AO353_04365: AO353_04365 - recombinase XerD, at 941,782 to 942,678
_04365
AO353_04370: AO353_04370 - 50S ribosomal protein L19, at 942,824 to 943,174
_04370
AO353_04375: AO353_04375 - tRNA (guanine-N1)-methyltransferase, at 943,220 to 943,972
_04375
Position (kb)
941
942
943 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 940.809 kb on - strand, within AO353_04360 at 940.993 kb on + strand, within AO353_04360 at 940.993 kb on + strand, within AO353_04360 at 940.993 kb on + strand, within AO353_04360 at 940.993 kb on + strand, within AO353_04360 at 940.994 kb on - strand, within AO353_04360 at 940.994 kb on - strand, within AO353_04360 at 940.994 kb on - strand, within AO353_04360 at 941.076 kb on + strand, within AO353_04360 at 941.076 kb on + strand, within AO353_04360 at 941.077 kb on - strand, within AO353_04360 at 941.077 kb on - strand, within AO353_04360 at 941.221 kb on + strand, within AO353_04360 at 941.221 kb on + strand, within AO353_04360 at 941.221 kb on + strand, within AO353_04360 at 941.221 kb on + strand, within AO353_04360 at 941.221 kb on + strand, within AO353_04360 at 941.222 kb on - strand, within AO353_04360 at 941.222 kb on - strand, within AO353_04360 at 941.222 kb on - strand, within AO353_04360 at 941.222 kb on - strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.236 kb on + strand, within AO353_04360 at 941.237 kb on - strand, within AO353_04360 at 941.237 kb on - strand, within AO353_04360 at 941.237 kb on - strand, within AO353_04360 at 941.258 kb on - strand, within AO353_04360 at 941.290 kb on + strand, within AO353_04360 at 941.291 kb on - strand, within AO353_04360 at 941.291 kb on - strand, within AO353_04360 at 941.291 kb on - strand, within AO353_04360 at 941.316 kb on - strand, within AO353_04360 at 941.316 kb on - strand, within AO353_04360 at 941.360 kb on + strand, within AO353_04360 at 941.360 kb on + strand, within AO353_04360 at 941.360 kb on + strand, within AO353_04360 at 941.361 kb on - strand, within AO353_04360 at 941.372 kb on + strand, within AO353_04360 at 941.372 kb on + strand, within AO353_04360 at 941.373 kb on - strand, within AO353_04360 at 941.483 kb on + strand at 941.483 kb on + strand at 941.484 kb on - strand at 941.484 kb on - strand at 941.542 kb on + strand at 941.542 kb on + strand at 941.542 kb on + strand at 941.549 kb on + strand at 941.549 kb on + strand at 941.549 kb on + strand at 941.549 kb on + strand at 941.550 kb on - strand at 941.550 kb on - strand at 941.550 kb on - strand at 941.550 kb on - strand at 941.587 kb on + strand at 941.588 kb on - strand at 941.843 kb on + strand at 941.843 kb on + strand at 941.843 kb on + strand at 942.178 kb on + strand, within AO353_04365 at 942.178 kb on + strand, within AO353_04365 at 942.178 kb on + strand, within AO353_04365 at 942.179 kb on - strand, within AO353_04365 at 942.248 kb on + strand, within AO353_04365 at 942.248 kb on + strand, within AO353_04365 at 942.248 kb on + strand, within AO353_04365 at 942.248 kb on + strand, within AO353_04365 at 942.248 kb on + strand, within AO353_04365 at 942.249 kb on - strand, within AO353_04365 at 942.422 kb on + strand, within AO353_04365 at 942.422 kb on + strand, within AO353_04365 at 942.429 kb on - strand, within AO353_04365 at 942.429 kb on - strand, within AO353_04365 at 942.462 kb on + strand, within AO353_04365 at 942.463 kb on - strand, within AO353_04365 at 942.476 kb on + strand, within AO353_04365 at 942.476 kb on + strand, within AO353_04365 at 942.477 kb on - strand, within AO353_04365 at 942.477 kb on - strand, within AO353_04365 at 942.477 kb on - strand, within AO353_04365 at 942.590 kb on + strand at 942.652 kb on + strand at 942.652 kb on + strand at 942.652 kb on + strand at 942.679 kb on - strand at 942.699 kb on + strand at 942.699 kb on + strand at 942.700 kb on - strand at 942.700 kb on - strand at 942.700 kb on - strand at 942.719 kb on + strand at 942.719 kb on + strand at 942.719 kb on + strand at 942.719 kb on + strand at 942.720 kb on - strand at 942.720 kb on - strand at 942.720 kb on - strand at 942.720 kb on - strand at 942.720 kb on - strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.763 kb on + strand at 942.764 kb on - strand at 942.764 kb on - strand at 942.764 kb on - strand at 942.764 kb on - strand at 942.876 kb on + strand, within AO353_04370 at 943.222 kb on - strand at 943.222 kb on - strand at 943.222 kb on - strand at 943.222 kb on - strand at 943.222 kb on - strand at 943.222 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 940,809 - AO353_04360 0.12 -0.9 940,993 + AO353_04360 0.37 -0.8 940,993 + AO353_04360 0.37 -2.8 940,993 + AO353_04360 0.37 -1.4 940,993 + AO353_04360 0.37 -2.0 940,994 - AO353_04360 0.38 -0.5 940,994 - AO353_04360 0.38 +1.8 940,994 - AO353_04360 0.38 -1.9 941,076 + AO353_04360 0.49 -1.6 941,076 + AO353_04360 0.49 +0.2 941,077 - AO353_04360 0.49 +0.4 941,077 - AO353_04360 0.49 +1.3 941,221 + AO353_04360 0.69 -0.5 941,221 + AO353_04360 0.69 -0.1 941,221 + AO353_04360 0.69 -0.6 941,221 + AO353_04360 0.69 -0.1 941,221 + AO353_04360 0.69 -0.9 941,222 - AO353_04360 0.69 -0.5 941,222 - AO353_04360 0.69 -2.1 941,222 - AO353_04360 0.69 +0.6 941,222 - AO353_04360 0.69 +0.2 941,236 + AO353_04360 0.71 -0.7 941,236 + AO353_04360 0.71 -0.6 941,236 + AO353_04360 0.71 -1.0 941,236 + AO353_04360 0.71 -0.6 941,236 + AO353_04360 0.71 -1.8 941,236 + AO353_04360 0.71 -0.1 941,237 - AO353_04360 0.71 -0.4 941,237 - AO353_04360 0.71 -1.2 941,237 - AO353_04360 0.71 -1.6 941,258 - AO353_04360 0.74 +0.4 941,290 + AO353_04360 0.78 -0.6 941,291 - AO353_04360 0.78 +0.8 941,291 - AO353_04360 0.78 +0.1 941,291 - AO353_04360 0.78 -1.5 941,316 - AO353_04360 0.82 -0.1 941,316 - AO353_04360 0.82 -0.0 941,360 + AO353_04360 0.88 -0.6 941,360 + AO353_04360 0.88 -0.6 941,360 + AO353_04360 0.88 +0.8 941,361 - AO353_04360 0.88 +0.2 941,372 + AO353_04360 0.89 -0.3 941,372 + AO353_04360 0.89 -2.6 941,373 - AO353_04360 0.89 +0.8 941,483 + -1.3 941,483 + -1.2 941,484 - +1.8 941,484 - +0.8 941,542 + +0.0 941,542 + -0.4 941,542 + +1.5 941,549 + -0.6 941,549 + +0.4 941,549 + +0.0 941,549 + +0.4 941,550 - -0.0 941,550 - +0.7 941,550 - +0.2 941,550 - +1.1 941,587 + +0.1 941,588 - +0.4 941,843 + -1.1 941,843 + -1.5 941,843 + -1.1 942,178 + AO353_04365 0.44 +0.7 942,178 + AO353_04365 0.44 -1.8 942,178 + AO353_04365 0.44 -0.1 942,179 - AO353_04365 0.44 -0.9 942,248 + AO353_04365 0.52 -0.1 942,248 + AO353_04365 0.52 -0.1 942,248 + AO353_04365 0.52 +0.5 942,248 + AO353_04365 0.52 +1.1 942,248 + AO353_04365 0.52 -0.1 942,249 - AO353_04365 0.52 -0.3 942,422 + AO353_04365 0.71 -1.1 942,422 + AO353_04365 0.71 -1.0 942,429 - AO353_04365 0.72 -0.5 942,429 - AO353_04365 0.72 -1.6 942,462 + AO353_04365 0.76 -0.5 942,463 - AO353_04365 0.76 -1.5 942,476 + AO353_04365 0.77 -1.3 942,476 + AO353_04365 0.77 -1.9 942,477 - AO353_04365 0.77 -0.5 942,477 - AO353_04365 0.77 -0.3 942,477 - AO353_04365 0.77 -0.4 942,590 + +1.4 942,652 + -0.8 942,652 + -0.9 942,652 + -1.1 942,679 - +0.6 942,699 + +0.3 942,699 + +0.4 942,700 - +0.1 942,700 - +0.4 942,700 - -0.2 942,719 + +0.3 942,719 + -0.2 942,719 + -0.2 942,719 + +1.1 942,720 - +0.1 942,720 - -0.9 942,720 - -0.5 942,720 - -0.7 942,720 - -0.0 942,763 + +0.2 942,763 + +0.8 942,763 + -0.8 942,763 + -0.2 942,763 + +0.3 942,763 + -0.9 942,763 + -0.2 942,763 + -0.5 942,764 - +0.4 942,764 - -0.2 942,764 - -0.8 942,764 - +0.4 942,876 + AO353_04370 0.15 -0.2 943,222 - -0.5 943,222 - +1.1 943,222 - -0.9 943,222 - +0.4 943,222 - -0.7 943,222 - -0.2
Or see this region's nucleotide sequence