Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3371 and Shewana3_3372 are separated by 12 nucleotides Shewana3_3372 and Shewana3_3373 are separated by 97 nucleotides
Shewana3_3371: Shewana3_3371 - hypothetical protein (RefSeq), at 4,042,959 to 4,043,522
_3371
Shewana3_3372: Shewana3_3372 - no description, at 4,043,535 to 4,043,882
_3372
Shewana3_3373: Shewana3_3373 - Na(+)-translocating NADH-quinone reductase subunit F (RefSeq), at 4,043,980 to 4,045,197
_3373
Position (kb)
4043
4044 Strain fitness (log2 ratio)
-1
0
1
2 at 4042.630 kb on - strand at 4042.630 kb on - strand at 4042.667 kb on - strand at 4042.847 kb on + strand at 4042.892 kb on + strand at 4042.897 kb on + strand at 4042.897 kb on - strand at 4042.999 kb on + strand at 4043.002 kb on - strand at 4043.262 kb on + strand, within Shewana3_3371 at 4043.269 kb on + strand, within Shewana3_3371 at 4043.380 kb on - strand, within Shewana3_3371 at 4043.384 kb on + strand, within Shewana3_3371 at 4043.490 kb on - strand at 4043.507 kb on + strand at 4043.569 kb on + strand at 4043.694 kb on - strand, within Shewana3_3372 at 4043.701 kb on + strand, within Shewana3_3372 at 4043.701 kb on + strand, within Shewana3_3372 at 4043.813 kb on + strand, within Shewana3_3372 at 4043.938 kb on + strand at 4044.055 kb on + strand at 4044.099 kb on - strand at 4044.314 kb on + strand, within Shewana3_3373 at 4044.356 kb on - strand, within Shewana3_3373 at 4044.435 kb on + strand, within Shewana3_3373 at 4044.454 kb on - strand, within Shewana3_3373 at 4044.675 kb on - strand, within Shewana3_3373 at 4044.679 kb on + strand, within Shewana3_3373
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,042,630 - +0.4 4,042,630 - +0.7 4,042,667 - +0.6 4,042,847 + +1.3 4,042,892 + -0.9 4,042,897 + +0.1 4,042,897 - +0.9 4,042,999 + +1.3 4,043,002 - +0.7 4,043,262 + Shewana3_3371 0.54 +0.2 4,043,269 + Shewana3_3371 0.55 +0.2 4,043,380 - Shewana3_3371 0.75 -1.2 4,043,384 + Shewana3_3371 0.75 +0.5 4,043,490 - +0.5 4,043,507 + -0.1 4,043,569 + +0.2 4,043,694 - Shewana3_3372 0.46 +1.9 4,043,701 + Shewana3_3372 0.48 -0.4 4,043,701 + Shewana3_3372 0.48 +0.3 4,043,813 + Shewana3_3372 0.80 +0.3 4,043,938 + +0.3 4,044,055 + +0.2 4,044,099 - +0.2 4,044,314 + Shewana3_3373 0.27 +0.4 4,044,356 - Shewana3_3373 0.31 +0.2 4,044,435 + Shewana3_3373 0.37 +0.5 4,044,454 - Shewana3_3373 0.39 +0.1 4,044,675 - Shewana3_3373 0.57 -0.7 4,044,679 + Shewana3_3373 0.57 +0.6
Or see this region's nucleotide sequence