Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt glyQ and Shewana3_0018 are separated by 118 nucleotides Shewana3_0018 and Shewana3_0019 are separated by 85 nucleotides
Shewana3_0017: glyQ - glycyl-tRNA synthetase subunit alpha (RefSeq), at 20,889 to 21,794
glyQ
Shewana3_0018: Shewana3_0018 - DNA-3-methyladenine glycosylase I (RefSeq), at 21,913 to 22,488
_0018
Shewana3_0019: Shewana3_0019 - amidohydrolase (RefSeq), at 22,574 to 25,762
_0019
Position (kb)
21
22
23 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 21.895 kb on + strand at 21.895 kb on + strand at 21.976 kb on + strand, within Shewana3_0018 at 21.976 kb on + strand, within Shewana3_0018 at 22.020 kb on + strand, within Shewana3_0018 at 22.025 kb on + strand, within Shewana3_0018 at 22.226 kb on - strand, within Shewana3_0018 at 22.271 kb on + strand, within Shewana3_0018 at 22.313 kb on + strand, within Shewana3_0018 at 22.340 kb on + strand, within Shewana3_0018 at 22.353 kb on + strand, within Shewana3_0018 at 22.353 kb on + strand, within Shewana3_0018 at 22.541 kb on + strand at 22.674 kb on - strand at 22.684 kb on - strand at 22.806 kb on + strand at 22.814 kb on - strand at 22.869 kb on + strand at 22.883 kb on - strand at 22.960 kb on + strand, within Shewana3_0019 at 22.991 kb on + strand, within Shewana3_0019 at 23.116 kb on + strand, within Shewana3_0019 at 23.126 kb on - strand, within Shewana3_0019 at 23.393 kb on + strand, within Shewana3_0019 at 23.401 kb on - strand, within Shewana3_0019
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 21,895 + -0.4 21,895 + +0.1 21,976 + Shewana3_0018 0.11 -1.4 21,976 + Shewana3_0018 0.11 +0.0 22,020 + Shewana3_0018 0.19 -0.1 22,025 + Shewana3_0018 0.19 +0.5 22,226 - Shewana3_0018 0.54 -1.2 22,271 + Shewana3_0018 0.62 +0.3 22,313 + Shewana3_0018 0.69 -1.6 22,340 + Shewana3_0018 0.74 +0.3 22,353 + Shewana3_0018 0.76 +0.5 22,353 + Shewana3_0018 0.76 -1.6 22,541 + +0.8 22,674 - -1.8 22,684 - -1.8 22,806 + +0.5 22,814 - -1.4 22,869 + +0.4 22,883 - +0.2 22,960 + Shewana3_0019 0.12 -1.6 22,991 + Shewana3_0019 0.13 +0.2 23,116 + Shewana3_0019 0.17 -0.2 23,126 - Shewana3_0019 0.17 -0.4 23,393 + Shewana3_0019 0.26 +0.8 23,401 - Shewana3_0019 0.26 -3.4
Or see this region's nucleotide sequence