Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3683 and Shew_3684 overlap by 4 nucleotides Shew_3684 and Shew_3685 are separated by 2 nucleotides Shew_3685 and Shew_3686 overlap by 17 nucleotides
Shew_3683: Shew_3683 - extracellular solute-binding protein (RefSeq), at 4,387,826 to 4,388,638
_3683
Shew_3684: Shew_3684 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 4,388,635 to 4,389,342
_3684
Shew_3685: Shew_3685 - ABC transporter-related protein (RefSeq), at 4,389,345 to 4,390,061
_3685
Shew_3686: Shew_3686 - molybdopterin-guanine dinucleotide biosynthesis protein A (RefSeq), at 4,390,045 to 4,390,635
_3686
Position (kb)
4388
4389
4390 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4387.893 kb on + strand at 4388.002 kb on - strand, within Shew_3683 at 4388.174 kb on + strand, within Shew_3683 at 4388.237 kb on + strand, within Shew_3683 at 4388.358 kb on - strand, within Shew_3683 at 4388.384 kb on - strand, within Shew_3683 at 4388.578 kb on - strand at 4388.638 kb on + strand at 4388.654 kb on + strand at 4388.768 kb on + strand, within Shew_3684 at 4388.868 kb on - strand, within Shew_3684 at 4388.941 kb on + strand, within Shew_3684 at 4389.268 kb on - strand, within Shew_3684 at 4389.421 kb on - strand, within Shew_3685 at 4389.503 kb on - strand, within Shew_3685 at 4389.509 kb on + strand, within Shew_3685 at 4389.547 kb on + strand, within Shew_3685 at 4389.716 kb on + strand, within Shew_3685 at 4389.809 kb on - strand, within Shew_3685 at 4389.929 kb on - strand, within Shew_3685 at 4390.248 kb on - strand, within Shew_3686 at 4390.248 kb on - strand, within Shew_3686
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 4,387,893 + +0.6 4,388,002 - Shew_3683 0.22 +2.7 4,388,174 + Shew_3683 0.43 +0.8 4,388,237 + Shew_3683 0.51 +1.0 4,388,358 - Shew_3683 0.65 +0.8 4,388,384 - Shew_3683 0.69 +1.1 4,388,578 - +0.3 4,388,638 + +0.5 4,388,654 + +0.7 4,388,768 + Shew_3684 0.19 +0.8 4,388,868 - Shew_3684 0.33 +1.0 4,388,941 + Shew_3684 0.43 +0.5 4,389,268 - Shew_3684 0.89 +0.9 4,389,421 - Shew_3685 0.11 +0.7 4,389,503 - Shew_3685 0.22 +0.7 4,389,509 + Shew_3685 0.23 +0.3 4,389,547 + Shew_3685 0.28 +1.3 4,389,716 + Shew_3685 0.52 +0.7 4,389,809 - Shew_3685 0.65 +3.0 4,389,929 - Shew_3685 0.81 +1.5 4,390,248 - Shew_3686 0.34 +0.8 4,390,248 - Shew_3686 0.34 +1.0
Or see this region's nucleotide sequence