Strain Fitness in Shewanella loihica PV-4 around Shew_3658

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
4,358,892	+		Shew_3657	0.68	+0.9
4,358,945	+		Shew_3657	0.70	+1.4
4,359,030	-		Shew_3657	0.75	+1.6
4,359,030	-		Shew_3657	0.75	+2.0
4,359,030	-		Shew_3657	0.75	+1.6
4,359,061	+		Shew_3657	0.76	+0.6
4,359,071	+		Shew_3657	0.77	+1.2
4,359,150	+		Shew_3657	0.80	+1.2
4,359,189	+		Shew_3657	0.82	+2.2
4,359,232	-		Shew_3657	0.84	+1.5
4,359,309	+		Shew_3657	0.88	-1.0
4,359,309	+		Shew_3657	0.88	-0.6
4,359,309	+		Shew_3657	0.88	-1.1
4,359,414	-				+1.7
4,359,547	+				-3.0
4,359,547	-				+1.2
4,359,547	-				+2.2
4,359,881	-				+2.9
4,359,918	-				+3.0
4,360,141	-		Shew_3658	0.34	+1.2
4,360,316	-		Shew_3658	0.57	+3.0
4,360,334	+		Shew_3658	0.59	+3.2
4,360,401	+		Shew_3658	0.68	+2.9
4,360,401	+		Shew_3658	0.68	+3.0
4,360,409	-		Shew_3658	0.69	+3.2
4,360,409	-		Shew_3658	0.69	+3.2
4,360,409	-		Shew_3658	0.69	+2.5
4,360,560	-		Shew_3658	0.88	+4.1
4,360,634	-				+3.4
4,360,653	+				+2.6
4,360,669	+				+1.6
4,360,720	-				+0.9
4,360,727	+				+4.9
4,360,767	+				+0.0
4,360,856	-		Shew_3659	0.15	+0.4
4,360,879	+		Shew_3659	0.20	-0.3
4,360,887	-		Shew_3659	0.21	-0.0
4,360,952	+		Shew_3659	0.33	+0.1
4,360,978	+		Shew_3659	0.38	-0.0
4,360,996	+		Shew_3659	0.41	-0.1
4,361,004	-		Shew_3659	0.43	+0.5
4,361,004	-		Shew_3659	0.43	+1.1
4,361,094	-		Shew_3659	0.59	+0.5
4,361,271	-				+0.1
4,361,375	+				-0.1
4,361,377	+				+0.1
4,361,377	+				+0.3
4,361,385	-				+0.2
4,361,385	-				+0.2
4,361,402	-				-1.3