Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3259 and Shew_3260 are separated by 537 nucleotides Shew_3260 and Shew_3261 are separated by 108 nucleotides Shew_3261 and Shew_3262 are separated by 105 nucleotides
Shew_3259: Shew_3259 - heavy metal sensor signal transduction histidine kinase (RefSeq), at 3,896,461 to 3,897,849
_3259
Shew_3260: Shew_3260 - porin (RefSeq), at 3,898,387 to 3,899,415
_3260
Shew_3261: Shew_3261 - thiopurine S-methyltransferase (RefSeq), at 3,899,524 to 3,900,180
_3261
Shew_3262: Shew_3262 - hypothetical protein (RefSeq), at 3,900,286 to 3,900,630
_3262
Position (kb)
3898
3899
3900 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3897.452 kb on + strand, within Shew_3259 at 3897.460 kb on + strand, within Shew_3259 at 3897.560 kb on - strand, within Shew_3259 at 3897.657 kb on + strand, within Shew_3259 at 3897.662 kb on + strand, within Shew_3259 at 3897.670 kb on - strand, within Shew_3259 at 3897.670 kb on - strand, within Shew_3259 at 3897.670 kb on - strand, within Shew_3259 at 3897.670 kb on - strand, within Shew_3259 at 3897.737 kb on + strand at 3897.742 kb on + strand at 3897.750 kb on - strand at 3897.750 kb on - strand at 3897.750 kb on - strand at 3897.751 kb on - strand at 3897.911 kb on - strand at 3898.429 kb on + strand at 3898.509 kb on + strand, within Shew_3260 at 3898.517 kb on - strand, within Shew_3260 at 3898.517 kb on - strand, within Shew_3260 at 3898.517 kb on - strand, within Shew_3260 at 3898.543 kb on + strand, within Shew_3260 at 3898.713 kb on - strand, within Shew_3260 at 3899.114 kb on + strand, within Shew_3260 at 3899.165 kb on + strand, within Shew_3260 at 3899.165 kb on + strand, within Shew_3260 at 3899.173 kb on - strand, within Shew_3260 at 3899.182 kb on + strand, within Shew_3260 at 3899.392 kb on - strand at 3899.710 kb on + strand, within Shew_3261 at 3899.860 kb on + strand, within Shew_3261 at 3899.860 kb on + strand, within Shew_3261 at 3899.879 kb on + strand, within Shew_3261 at 3900.228 kb on - strand at 3900.278 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,897,452 + Shew_3259 0.71 +0.5 3,897,460 + Shew_3259 0.72 -0.2 3,897,560 - Shew_3259 0.79 -0.2 3,897,657 + Shew_3259 0.86 -1.1 3,897,662 + Shew_3259 0.86 +0.9 3,897,670 - Shew_3259 0.87 -1.0 3,897,670 - Shew_3259 0.87 +0.6 3,897,670 - Shew_3259 0.87 +0.5 3,897,670 - Shew_3259 0.87 +1.3 3,897,737 + +0.2 3,897,742 + +0.7 3,897,750 - -0.2 3,897,750 - -1.3 3,897,750 - +0.1 3,897,751 - -0.1 3,897,911 - -0.1 3,898,429 + -1.5 3,898,509 + Shew_3260 0.12 -0.4 3,898,517 - Shew_3260 0.13 +1.1 3,898,517 - Shew_3260 0.13 -1.9 3,898,517 - Shew_3260 0.13 -1.2 3,898,543 + Shew_3260 0.15 -1.6 3,898,713 - Shew_3260 0.32 -0.4 3,899,114 + Shew_3260 0.71 -1.5 3,899,165 + Shew_3260 0.76 -1.9 3,899,165 + Shew_3260 0.76 -1.7 3,899,173 - Shew_3260 0.76 -2.1 3,899,182 + Shew_3260 0.77 -2.8 3,899,392 - -1.6 3,899,710 + Shew_3261 0.28 +2.0 3,899,860 + Shew_3261 0.51 -2.6 3,899,860 + Shew_3261 0.51 -1.8 3,899,879 + Shew_3261 0.54 -1.3 3,900,228 - +0.6 3,900,278 - -0.0
Or see this region's nucleotide sequence