Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2762 and Shew_2763 overlap by 8 nucleotides Shew_2763 and Shew_2764 are separated by 60 nucleotides Shew_2764 and Shew_2765 are separated by 182 nucleotides Shew_2765 and Shew_2766 are separated by 371 nucleotides
Shew_2762: Shew_2762 - hypothetical protein (RefSeq), at 3,267,937 to 3,268,326
_2762
Shew_2763: Shew_2763 - dienelactone hydrolase (RefSeq), at 3,268,319 to 3,269,041
_2763
Shew_2764: Shew_2764 - DNA-binding transcriptional activator GcvA (RefSeq), at 3,269,102 to 3,270,013
_2764
Shew_2765: Shew_2765 - hypothetical protein (RefSeq), at 3,270,196 to 3,270,426
_2765
Shew_2766: Shew_2766 - thiamine biosynthesis protein ThiI (RefSeq), at 3,270,798 to 3,272,255
_2766
Position (kb)
3269
3270
3271 Strain fitness (log2 ratio)
-1
0
1
2 at 3268.332 kb on - strand at 3268.392 kb on - strand, within Shew_2763 at 3268.671 kb on + strand, within Shew_2763 at 3268.938 kb on + strand, within Shew_2763 at 3269.551 kb on + strand, within Shew_2764 at 3269.551 kb on + strand, within Shew_2764 at 3270.528 kb on + strand at 3270.528 kb on + strand at 3270.528 kb on + strand at 3270.536 kb on - strand at 3270.987 kb on + strand, within Shew_2766
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 3,268,332 - +0.4 3,268,392 - Shew_2763 0.10 -0.3 3,268,671 + Shew_2763 0.49 +0.6 3,268,938 + Shew_2763 0.86 +0.2 3,269,551 + Shew_2764 0.49 +2.7 3,269,551 + Shew_2764 0.49 -0.5 3,270,528 + -0.9 3,270,528 + +1.0 3,270,528 + +0.5 3,270,536 - +1.8 3,270,987 + Shew_2766 0.13 +0.8
Or see this region's nucleotide sequence