Strain Fitness in Shewanella loihica PV-4 around Shew_2607
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,072,152 | + | -0.1 | |||
3,072,353 | + | Shew_2606 | 0.26 | -1.2 | |
3,072,353 | + | Shew_2606 | 0.26 | -1.5 | |
3,072,361 | - | Shew_2606 | 0.27 | +1.0 | |
3,072,361 | - | Shew_2606 | 0.27 | -0.2 | |
3,072,361 | - | Shew_2606 | 0.27 | -2.1 | |
3,073,006 | - | +0.1 | |||
3,073,125 | + | -1.3 | |||
3,073,733 | + | Shew_2607 | 0.57 | +0.8 | |
3,073,754 | + | Shew_2607 | 0.59 | +1.3 | |
3,073,853 | - | Shew_2607 | 0.67 | +0.4 | |
3,074,176 | - | +0.1 | |||
3,074,243 | + | +0.2 | |||
3,074,383 | + | +0.2 | |||
3,074,413 | - | -0.1 | |||
3,074,413 | - | +0.2 | |||
3,074,423 | + | -1.2 | |||
3,074,518 | - | Shew_2608 | 0.12 | -0.1 | |
3,074,545 | + | Shew_2608 | 0.14 | +2.1 | |
3,074,718 | - | Shew_2608 | 0.30 | +0.5 | |
3,075,007 | - | Shew_2608 | 0.57 | -0.1 |
Or see this region's nucleotide sequence