Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2512 and Shew_2513 are separated by 18 nucleotides Shew_2513 and Shew_2514 are separated by 73 nucleotides Shew_2514 and Shew_2515 are separated by 250 nucleotides Shew_2515 and Shew_2516 are separated by 83 nucleotides
Shew_2512: Shew_2512 - peptidylprolyl isomerase (RefSeq), at 2,956,409 to 2,956,921
_2512
Shew_2513: Shew_2513 - UDP-2,3-diacylglucosamine hydrolase (RefSeq), at 2,956,940 to 2,957,668
_2513
Shew_2514: Shew_2514 - tRNA--hydroxylase (RefSeq), at 2,957,742 to 2,958,512
_2514
Shew_2515: Shew_2515 - hypothetical protein (RefSeq), at 2,958,763 to 2,959,359
_2515
Shew_2516: Shew_2516 - glutaminyl-tRNA synthetase (RefSeq), at 2,959,443 to 2,961,113
_2516
Position (kb)
2957
2958
2959 Strain fitness (log2 ratio)
-1
0
1
2 at 2958.029 kb on + strand, within Shew_2514 at 2958.102 kb on - strand, within Shew_2514 at 2958.196 kb on + strand, within Shew_2514 at 2959.193 kb on + strand, within Shew_2515 at 2959.216 kb on - strand, within Shew_2515 at 2959.216 kb on - strand, within Shew_2515 at 2959.216 kb on - strand, within Shew_2515 at 2959.277 kb on + strand, within Shew_2515 at 2959.282 kb on + strand, within Shew_2515 at 2959.411 kb on - strand at 2959.433 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,958,029 + Shew_2514 0.37 +0.2 2,958,102 - Shew_2514 0.47 +2.1 2,958,196 + Shew_2514 0.59 +0.6 2,959,193 + Shew_2515 0.72 +0.5 2,959,216 - Shew_2515 0.76 -0.2 2,959,216 - Shew_2515 0.76 +0.7 2,959,216 - Shew_2515 0.76 +0.2 2,959,277 + Shew_2515 0.86 -1.2 2,959,282 + Shew_2515 0.87 +1.0 2,959,411 - +0.1 2,959,433 - +1.8
Or see this region's nucleotide sequence