Strain Fitness in Shewanella loihica PV-4 around Shew_2406
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,822,678 | - | Shew_2405 | 0.26 | +0.7 | |
2,822,804 | + | Shew_2405 | 0.36 | +0.6 | |
2,822,812 | + | Shew_2405 | 0.36 | +0.3 | |
2,822,844 | + | Shew_2405 | 0.39 | -1.2 | |
2,823,096 | - | Shew_2405 | 0.59 | -0.5 | |
2,823,097 | - | Shew_2405 | 0.60 | -1.8 | |
2,823,258 | - | Shew_2405 | 0.73 | +0.3 | |
2,823,294 | + | Shew_2405 | 0.75 | -0.2 | |
2,823,302 | - | Shew_2405 | 0.76 | +0.4 | |
2,823,502 | + | -0.5 | |||
2,824,242 | + | Shew_2406 | 0.64 | +2.4 | |
2,824,333 | + | Shew_2406 | 0.73 | +0.6 | |
2,824,751 | - | +0.4 | |||
2,824,960 | - | Shew_2407 | 0.21 | +0.9 | |
2,825,288 | - | Shew_2407 | 0.53 | -0.3 | |
2,825,449 | - | Shew_2407 | 0.68 | +1.7 | |
2,825,576 | - | Shew_2407 | 0.81 | +0.4 |
Or see this region's nucleotide sequence