Strain Fitness in Shewanella loihica PV-4 around Shew_1089

Experiment: Thallium(I) acetate 10 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpgi and Shew_1089 are separated by 13 nucleotidesShew_1089 and Shew_1090 are separated by 273 nucleotides Shew_1088: pgi - glucose-6-phosphate isomerase (RefSeq), at 1,252,316 to 1,253,953 pgi Shew_1089: Shew_1089 - transaldolase B (RefSeq), at 1,253,967 to 1,254,923 _1089 Shew_1090: Shew_1090 - OmpA/MotB domain-containing protein (RefSeq), at 1,255,197 to 1,256,300 _1090 Position (kb) 1253 1254 1255Strain fitness (log2 ratio) -2 -1 0 1at 1253.964 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml
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1,253,964 - -2.4

Or see this region's nucleotide sequence