Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0414 and Shew_0415 are separated by 36 nucleotides Shew_0415 and Shew_0416 are separated by 146 nucleotides Shew_0416 and Shew_0417 are separated by 168 nucleotides Shew_0417 and Shew_0418 are separated by 3 nucleotides
Shew_0414: Shew_0414 - ABC-2 type transporter (RefSeq), at 468,027 to 469,172
_0414
Shew_0415: Shew_0415 - hypothetical protein (RefSeq), at 469,209 to 469,751
_0415
Shew_0416: Shew_0416 - peptidase U62, modulator of DNA gyrase (RefSeq), at 469,898 to 471,238
_0416
Shew_0417: Shew_0417 - ArsR family transcriptional regulator (RefSeq), at 471,407 to 471,754
_0417
Shew_0418: Shew_0418 - arsenical-resistance protein (RefSeq), at 471,758 to 472,792
_0418
Position (kb) 469
470
471
472 Strain fitness (log2 ratio) -2
-1
0
1
2 at 469.364 kb on - strand, within Shew_0415 at 469.515 kb on - strand, within Shew_0415 at 469.560 kb on - strand, within Shew_0415 at 469.715 kb on + strand at 469.724 kb on + strand at 469.732 kb on - strand at 470.142 kb on - strand, within Shew_0416 at 470.271 kb on - strand, within Shew_0416 at 470.773 kb on + strand, within Shew_0416 at 470.900 kb on - strand, within Shew_0416 at 470.983 kb on + strand, within Shew_0416 at 470.996 kb on - strand, within Shew_0416 at 471.091 kb on + strand, within Shew_0416 at 471.091 kb on + strand, within Shew_0416 at 471.099 kb on - strand, within Shew_0416 at 471.104 kb on + strand, within Shew_0416 at 471.314 kb on - strand at 471.431 kb on - strand at 471.437 kb on + strand at 471.466 kb on + strand, within Shew_0417 at 471.623 kb on - strand, within Shew_0417 at 471.677 kb on - strand, within Shew_0417 at 472.188 kb on + strand, within Shew_0418 at 472.196 kb on - strand, within Shew_0418 at 472.196 kb on - strand, within Shew_0418
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 469,364 - Shew_0415 0.29 +0.2 469,515 - Shew_0415 0.56 -0.2 469,560 - Shew_0415 0.65 -0.9 469,715 + +0.4 469,724 + -1.0 469,732 - -0.0 470,142 - Shew_0416 0.18 +0.8 470,271 - Shew_0416 0.28 +0.2 470,773 + Shew_0416 0.65 +1.0 470,900 - Shew_0416 0.75 +1.0 470,983 + Shew_0416 0.81 +1.4 470,996 - Shew_0416 0.82 +0.7 471,091 + Shew_0416 0.89 +0.1 471,091 + Shew_0416 0.89 +0.6 471,099 - Shew_0416 0.90 +1.0 471,104 + Shew_0416 0.90 +0.9 471,314 - -0.3 471,431 - +0.1 471,437 + +0.0 471,466 + Shew_0417 0.17 +0.5 471,623 - Shew_0417 0.62 -1.9 471,677 - Shew_0417 0.78 +1.8 472,188 + Shew_0418 0.42 +1.6 472,196 - Shew_0418 0.42 -0.0 472,196 - Shew_0418 0.42 +0.3
Or see this region's nucleotide sequence