Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1877

Experiment: biofilm from flask tested for biofilms

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm from flask tested for biofilms
1,947,662	+		Synpcc7942_1875	0.69	-1.3
1,947,679	-		Synpcc7942_1875	0.70	+0.6
1,947,699	-		Synpcc7942_1875	0.71	+0.6
1,947,704	+		Synpcc7942_1875	0.72	+1.4
1,947,704	+		Synpcc7942_1875	0.72	+0.8
1,947,712	-		Synpcc7942_1875	0.72	-0.5
1,947,730	-		Synpcc7942_1875	0.73	-0.4
1,947,818	-		Synpcc7942_1875	0.80	+2.2
1,947,829	+		Synpcc7942_1875	0.81	-0.7
1,947,923	+		Synpcc7942_1875	0.87	+0.4
1,947,968	-				-0.2
1,947,993	+				+0.6
1,948,043	+				-0.4
1,948,051	-				-1.1
1,948,080	-				-0.5
1,948,098	+				-0.2
1,948,098	+				+1.7
1,948,106	-				+0.5
1,948,106	-				+0.2
1,948,111	-				-1.0
1,948,111	-				+0.1
1,948,133	-				+2.1
1,948,183	-				+0.2
1,948,201	+				-0.2
1,948,208	-				-0.8
1,948,209	-				-0.6
1,948,221	+				-0.8
1,948,239	+				-0.6
1,948,257	-		Synpcc7942_1876	0.14	-0.1
1,948,311	+		Synpcc7942_1876	0.28	+0.0
1,948,311	+		Synpcc7942_1876	0.28	+0.6
1,948,316	+		Synpcc7942_1876	0.30	-0.2
1,948,322	-		Synpcc7942_1876	0.31	+0.6
1,948,356	-		Synpcc7942_1876	0.40	-0.1
1,948,356	-		Synpcc7942_1876	0.40	+0.5
1,948,373	+		Synpcc7942_1876	0.45	-0.2
1,948,381	-		Synpcc7942_1876	0.47	-1.5
1,948,396	+		Synpcc7942_1876	0.51	-0.3
1,948,398	+		Synpcc7942_1876	0.51	-0.2
1,948,398	+		Synpcc7942_1876	0.51	-0.4
1,948,398	+		Synpcc7942_1876	0.51	+1.0
1,948,398	+		Synpcc7942_1876	0.51	+0.7
1,948,398	+		Synpcc7942_1876	0.51	+0.4
1,948,398	+		Synpcc7942_1876	0.51	-0.6
1,948,398	+		Synpcc7942_1876	0.51	-0.8
1,948,406	-		Synpcc7942_1876	0.53	+0.0
1,948,406	-		Synpcc7942_1876	0.53	+0.0
1,948,406	-		Synpcc7942_1876	0.53	-0.0
1,948,406	-		Synpcc7942_1876	0.53	+1.3
1,948,406	-		Synpcc7942_1876	0.53	+1.3
1,948,406	-		Synpcc7942_1876	0.53	+0.0
1,948,486	-		Synpcc7942_1876	0.74	+0.0
1,948,488	+		Synpcc7942_1876	0.75	+0.5
1,948,525	+		Synpcc7942_1876	0.85	-0.4
1,948,574	+				+0.1
1,948,580	+				-0.4
1,948,580	+				-0.5
1,948,582	-				+0.8
1,948,635	-				-0.6
1,948,663	-				+0.6
1,948,670	-				-1.9
1,948,675	-				-0.1
1,948,682	+				-1.5
1,948,688	+				-1.3
1,948,698	-				-0.1
1,948,707	-				-1.6
1,948,745	+				-1.1
1,948,745	+				-2.3
1,948,745	+				-0.7
1,948,750	+				+0.2
1,948,753	-				-0.9
1,948,765	-				-1.9
1,948,765	-				-0.4
1,948,765	-				-1.2
1,948,765	-				-1.2
1,948,768	-				-0.6
1,948,768	-				-1.2
1,948,788	-				-0.7
1,948,793	+				-0.6
1,948,793	+				-0.8
1,948,801	-				-0.2
1,948,801	-				-1.3
1,948,801	-				-0.2
1,948,801	-				-0.7
1,948,801	-				-0.1
1,948,821	+				+1.0
1,948,821	+				-2.9
1,948,826	+				-1.1
1,948,829	-				-1.5
1,948,833	-				-1.5
1,948,834	-				-0.2
1,948,850	+				+0.0
1,948,851	-				-1.8
1,948,868	+		Synpcc7942_1877	0.10	-1.5
1,948,870	-		Synpcc7942_1877	0.10	-0.3
1,948,876	-		Synpcc7942_1877	0.11	-0.6
1,948,893	+		Synpcc7942_1877	0.12	-2.7
1,948,893	+		Synpcc7942_1877	0.12	+0.3
1,948,901	-		Synpcc7942_1877	0.12	-2.3
1,948,901	-		Synpcc7942_1877	0.12	-1.8
1,948,901	-		Synpcc7942_1877	0.12	-2.1
1,948,901	-		Synpcc7942_1877	0.12	-0.6
1,948,901	-		Synpcc7942_1877	0.12	-0.3
1,948,908	+		Synpcc7942_1877	0.12	-1.2
1,948,908	+		Synpcc7942_1877	0.12	-1.2
1,948,916	-		Synpcc7942_1877	0.13	-0.2
1,948,916	-		Synpcc7942_1877	0.13	-1.3
1,948,920	-		Synpcc7942_1877	0.13	-1.6
1,948,927	+		Synpcc7942_1877	0.13	+0.3
1,948,957	+		Synpcc7942_1877	0.15	-0.8
1,948,965	-		Synpcc7942_1877	0.15	-1.4
1,948,975	+		Synpcc7942_1877	0.16	-1.0
1,948,990	+		Synpcc7942_1877	0.16	-0.9
1,948,990	+		Synpcc7942_1877	0.16	-0.6
1,948,990	+		Synpcc7942_1877	0.16	-0.8
1,948,998	-		Synpcc7942_1877	0.17	-1.0
1,948,998	-		Synpcc7942_1877	0.17	-0.7
1,948,998	-		Synpcc7942_1877	0.17	-1.9
1,949,004	+		Synpcc7942_1877	0.17	-0.5
1,949,013	+		Synpcc7942_1877	0.18	-3.2
1,949,020	-		Synpcc7942_1877	0.18	+0.4
1,949,020	-		Synpcc7942_1877	0.18	-0.1
1,949,021	-		Synpcc7942_1877	0.18	+2.0
1,949,021	-		Synpcc7942_1877	0.18	-0.6
1,949,081	-		Synpcc7942_1877	0.21	-1.2
1,949,104	+		Synpcc7942_1877	0.22	-1.9
1,949,113	-		Synpcc7942_1877	0.23	+0.1
1,949,122	-		Synpcc7942_1877	0.23	-2.3
1,949,133	+		Synpcc7942_1877	0.24	-0.5
1,949,143	+		Synpcc7942_1877	0.24	-1.3
1,949,143	+		Synpcc7942_1877	0.24	-0.9
1,949,143	+		Synpcc7942_1877	0.24	-1.9
1,949,151	-		Synpcc7942_1877	0.25	-0.8
1,949,151	-		Synpcc7942_1877	0.25	-0.8
1,949,151	-		Synpcc7942_1877	0.25	-1.4
1,949,156	+		Synpcc7942_1877	0.25	-0.7
1,949,156	-		Synpcc7942_1877	0.25	-1.3
1,949,167	-		Synpcc7942_1877	0.25	-2.8
1,949,177	+		Synpcc7942_1877	0.26	-0.8
1,949,196	-		Synpcc7942_1877	0.27	-0.1
1,949,196	-		Synpcc7942_1877	0.27	-0.8
1,949,198	+		Synpcc7942_1877	0.27	+0.1
1,949,216	+		Synpcc7942_1877	0.28	-1.5
1,949,217	-		Synpcc7942_1877	0.28	-1.0
1,949,226	+		Synpcc7942_1877	0.28	-2.1
1,949,226	+		Synpcc7942_1877	0.28	-1.4
1,949,226	+		Synpcc7942_1877	0.28	-0.8
1,949,269	+		Synpcc7942_1877	0.30	-0.7
1,949,269	+		Synpcc7942_1877	0.30	-0.5
1,949,282	+		Synpcc7942_1877	0.31	-3.0
1,949,289	+		Synpcc7942_1877	0.31	-1.0
1,949,297	-		Synpcc7942_1877	0.32	-0.1
1,949,297	-		Synpcc7942_1877	0.32	-0.8
1,949,302	-		Synpcc7942_1877	0.32	+0.5
1,949,307	-		Synpcc7942_1877	0.32	-0.8
1,949,316	+		Synpcc7942_1877	0.33	-1.3
1,949,321	+		Synpcc7942_1877	0.33	-0.7
1,949,322	-		Synpcc7942_1877	0.33	+0.9
1,949,332	-		Synpcc7942_1877	0.34	+0.7
1,949,334	-		Synpcc7942_1877	0.34	-0.6
1,949,388	+		Synpcc7942_1877	0.36	-1.5
1,949,430	-		Synpcc7942_1877	0.38	-0.9
1,949,430	-		Synpcc7942_1877	0.38	-2.0
1,949,474	-		Synpcc7942_1877	0.41	-0.1
1,949,476	+				-1.2
1,949,491	-		Synpcc7942_1877	0.41	+0.2
1,949,496	-		Synpcc7942_1877	0.42	-1.6
1,949,508	-		Synpcc7942_1877	0.42	-0.5
1,949,508	-		Synpcc7942_1877	0.42	-0.5
1,949,530	+		Synpcc7942_1877	0.43	-1.2
1,949,532	-				-0.8
1,949,535	+		Synpcc7942_1877	0.44	+0.1
1,949,543	-		Synpcc7942_1877	0.44	-0.4
1,949,545	+		Synpcc7942_1877	0.44	+0.7
1,949,548	-		Synpcc7942_1877	0.44	-1.4
1,949,550	+		Synpcc7942_1877	0.44	-0.4
1,949,550	+		Synpcc7942_1877	0.44	-0.8
1,949,615	+		Synpcc7942_1877	0.48	-0.4
1,949,623	-		Synpcc7942_1877	0.48	-1.4
1,949,635	-		Synpcc7942_1877	0.49	+0.2
1,949,642	-		Synpcc7942_1877	0.49	-0.7
1,949,668	+		Synpcc7942_1877	0.50	-2.3
1,949,688	+		Synpcc7942_1877	0.51	-0.9
1,949,801	-		Synpcc7942_1877	0.57	-1.6
1,949,801	-		Synpcc7942_1877	0.57	-0.7
1,949,807	+				-0.2
1,949,830	+		Synpcc7942_1877	0.58	-1.1
1,949,847	-		Synpcc7942_1877	0.59	-0.5
1,949,850	-				-1.0
1,949,866	-		Synpcc7942_1877	0.60	-1.1
1,949,868	+		Synpcc7942_1877	0.60	-2.1
1,949,868	+		Synpcc7942_1877	0.60	-3.1
1,949,868	+		Synpcc7942_1877	0.60	-0.5
1,949,876	-		Synpcc7942_1877	0.61	-1.1
1,949,876	-		Synpcc7942_1877	0.61	-1.0
1,949,879	+		Synpcc7942_1877	0.61	-0.4
1,949,903	+				-2.2
1,949,903	+		Synpcc7942_1877	0.62	-0.5
1,949,911	-		Synpcc7942_1877	0.62	-1.5
1,949,911	-		Synpcc7942_1877	0.62	-0.3
1,949,911	-		Synpcc7942_1877	0.62	-0.8
1,949,911	-		Synpcc7942_1877	0.62	-0.7
1,950,006	-		Synpcc7942_1877	0.67	-2.0
1,950,082	+		Synpcc7942_1877	0.71	-0.3
1,950,096	+		Synpcc7942_1877	0.72	-1.2
1,950,096	+		Synpcc7942_1877	0.72	-1.6
1,950,096	+		Synpcc7942_1877	0.72	-1.0
1,950,101	+		Synpcc7942_1877	0.72	+1.5
1,950,101	-		Synpcc7942_1877	0.72	-1.4
1,950,104	-		Synpcc7942_1877	0.72	-1.3
1,950,104	-		Synpcc7942_1877	0.72	-0.8
1,950,109	-		Synpcc7942_1877	0.72	-2.0
1,950,109	-		Synpcc7942_1877	0.72	-0.9
1,950,143	+		Synpcc7942_1877	0.74	-1.7
1,950,169	-		Synpcc7942_1877	0.75	-1.8
1,950,182	+		Synpcc7942_1877	0.76	+0.3
1,950,193	-		Synpcc7942_1877	0.76	-0.8
1,950,198	-		Synpcc7942_1877	0.77	-1.3
1,950,272	-		Synpcc7942_1877	0.80	-3.2
1,950,272	-		Synpcc7942_1877	0.80	-1.1
1,950,294	+		Synpcc7942_1877	0.82	+0.1
1,950,309	-		Synpcc7942_1877	0.82	+1.0
1,950,311	+		Synpcc7942_1877	0.82	+1.3
1,950,334	-		Synpcc7942_1877	0.84	-1.4
1,950,336	+		Synpcc7942_1877	0.84	-0.6
1,950,344	-		Synpcc7942_1877	0.84	+0.0
1,950,364	-		Synpcc7942_1877	0.85	-0.6
1,950,397	-		Synpcc7942_1877	0.87	-1.1
1,950,397	-		Synpcc7942_1877	0.87	-0.8
1,950,405	+		Synpcc7942_1877	0.87	-0.7
1,950,415	+		Synpcc7942_1877	0.88	-1.0
1,950,418	-		Synpcc7942_1877	0.88	-1.5
1,950,418	-		Synpcc7942_1877	0.88	-1.3
1,950,421	+		Synpcc7942_1877	0.88	-2.5
1,950,423	-		Synpcc7942_1877	0.88	-1.1
1,950,433	+		Synpcc7942_1877	0.88	-3.6
1,950,434	+		Synpcc7942_1877	0.89	-0.6
1,950,434	-		Synpcc7942_1877	0.89	-1.2
1,950,442	-		Synpcc7942_1877	0.89	-1.1
1,950,442	-				+0.4
1,950,451	+		Synpcc7942_1877	0.89	-0.8
1,950,451	+		Synpcc7942_1877	0.89	-2.2
1,950,452	-		Synpcc7942_1877	0.89	-0.3
1,950,454	-		Synpcc7942_1877	0.90	-1.7
1,950,471	+				-0.8
1,950,479	-				-1.1
1,950,479	-				-1.5
1,950,479	-				+0.1
1,950,481	-				-1.3
1,950,490	+				-0.8
1,950,498	-				-1.1
1,950,588	+				-1.1
1,950,596	-				-1.9
1,950,621	+				-1.8
1,950,622	+				-0.8
1,950,629	-				-0.1
1,950,630	-				-1.1
1,950,630	-				-0.4
1,950,636	-				+0.5
1,950,646	+				-0.4
1,950,656	-				-1.1
1,950,659	-				-0.3
1,950,665	-				-0.1
1,950,679	-				+0.3
1,950,695	+				-0.2
1,950,711	-				+0.2
1,950,726	+				+1.0
1,950,735	-				-2.2
1,950,743	+				-0.1
1,950,743	+				-1.1
1,950,762	+		Synpcc7942_1878	0.10	-0.6
1,950,762	+		Synpcc7942_1878	0.10	-1.7
1,950,770	-		Synpcc7942_1878	0.11	-2.4
1,950,787	+		Synpcc7942_1878	0.13	-0.6
1,950,788	+		Synpcc7942_1878	0.13	-1.2
1,950,788	+		Synpcc7942_1878	0.13	-0.5
1,950,797	+		Synpcc7942_1878	0.14	-0.6
1,950,797	-		Synpcc7942_1878	0.14	-1.0
1,950,797	-				-2.2
1,950,797	-		Synpcc7942_1878	0.14	-1.2
1,950,799	+		Synpcc7942_1878	0.14	-0.7
1,950,799	+		Synpcc7942_1878	0.14	-0.8
1,950,799	+		Synpcc7942_1878	0.14	-2.2
1,950,799	+		Synpcc7942_1878	0.14	-1.2
1,950,799	+		Synpcc7942_1878	0.14	-1.2
1,950,807	-		Synpcc7942_1878	0.15	-1.3
1,950,807	-		Synpcc7942_1878	0.15	-0.8
1,950,813	-		Synpcc7942_1878	0.15	-2.0
1,950,813	-				-0.6
1,950,839	-		Synpcc7942_1878	0.18	-2.6
1,950,854	-		Synpcc7942_1878	0.20	-0.2
1,950,885	-		Synpcc7942_1878	0.23	-2.5
1,950,893	-		Synpcc7942_1878	0.23	-0.2
1,950,897	+		Synpcc7942_1878	0.24	-0.8
1,950,899	-		Synpcc7942_1878	0.24	-2.4
1,950,900	+		Synpcc7942_1878	0.24	+0.1
1,950,900	+		Synpcc7942_1878	0.24	-1.0
1,950,952	+		Synpcc7942_1878	0.29	-0.5
1,950,952	+		Synpcc7942_1878	0.29	-0.8
1,950,952	+		Synpcc7942_1878	0.29	-1.1
1,950,958	+		Synpcc7942_1878	0.30	-1.2
1,950,958	+		Synpcc7942_1878	0.30	-1.6
1,950,960	+		Synpcc7942_1878	0.30	-0.2
1,950,960	-		Synpcc7942_1878	0.30	-0.6
1,950,966	+		Synpcc7942_1878	0.31	+1.5
1,950,967	-		Synpcc7942_1878	0.31	-0.7
1,950,970	-		Synpcc7942_1878	0.31	-2.2
1,950,983	+		Synpcc7942_1878	0.33	-2.6
1,950,984	+		Synpcc7942_1878	0.33	-0.4
1,951,008	-		Synpcc7942_1878	0.35	-1.8
1,951,015	-		Synpcc7942_1878	0.36	+0.1
1,951,043	+		Synpcc7942_1878	0.39	-0.9
1,951,061	-		Synpcc7942_1878	0.40	-1.2
1,951,062	+		Synpcc7942_1878	0.40	+0.1
1,951,071	-		Synpcc7942_1878	0.41	+0.2
1,951,086	-		Synpcc7942_1878	0.43	-0.4
1,951,095	+		Synpcc7942_1878	0.44	-0.6
1,951,108	-		Synpcc7942_1878	0.45	-1.9
1,951,115	+		Synpcc7942_1878	0.46	-0.2
1,951,116	+		Synpcc7942_1878	0.46	-1.3
1,951,117	-		Synpcc7942_1878	0.46	-0.7
1,951,134	-		Synpcc7942_1878	0.48	-0.9
1,951,150	-		Synpcc7942_1878	0.49	-1.2
1,951,197	+		Synpcc7942_1878	0.54	-1.7
1,951,207	-		Synpcc7942_1878	0.55	-1.8
1,951,250	-		Synpcc7942_1878	0.59	-0.8
1,951,267	+		Synpcc7942_1878	0.61	-0.9
1,951,267	+		Synpcc7942_1878	0.61	-1.8
1,951,267	+		Synpcc7942_1878	0.61	-1.2
1,951,267	+		Synpcc7942_1878	0.61	-0.3
1,951,271	+		Synpcc7942_1878	0.62	-0.9
1,951,275	-		Synpcc7942_1878	0.62	-1.9
1,951,275	-		Synpcc7942_1878	0.62	-1.1
1,951,283	+		Synpcc7942_1878	0.63	-1.0
1,951,284	+		Synpcc7942_1878	0.63	-1.4
1,951,286	+				-1.0
1,951,289	+		Synpcc7942_1878	0.63	-1.2
1,951,291	+		Synpcc7942_1878	0.64	+2.1
1,951,297	-		Synpcc7942_1878	0.64	-0.3
1,951,309	+		Synpcc7942_1878	0.65	-2.5
1,951,362	+		Synpcc7942_1878	0.71	-1.0
1,951,368	+		Synpcc7942_1878	0.71	-0.4
1,951,370	-		Synpcc7942_1878	0.72	-0.5