Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5654 and Pf6N2E2_5655 are separated by 260 nucleotides Pf6N2E2_5655 and Pf6N2E2_5656 are separated by 460 nucleotides
Pf6N2E2_5654 - FIG00957532: hypothetical protein, at 6,465,056 to 6,466,042
_5654
Pf6N2E2_5655 - Prophage antirepressor, at 6,466,303 to 6,466,752
_5655
Pf6N2E2_5656 - Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1), at 6,467,213 to 6,468,460
_5656
Position (kb)
6466
6467 Strain fitness (log2 ratio)
-1
0
1
2 at 6465.381 kb on + strand, within Pf6N2E2_5654 at 6465.411 kb on + strand, within Pf6N2E2_5654 at 6465.411 kb on + strand, within Pf6N2E2_5654 at 6465.412 kb on - strand, within Pf6N2E2_5654 at 6465.412 kb on - strand, within Pf6N2E2_5654 at 6465.438 kb on + strand, within Pf6N2E2_5654 at 6465.681 kb on + strand, within Pf6N2E2_5654 at 6465.681 kb on + strand, within Pf6N2E2_5654 at 6465.681 kb on + strand, within Pf6N2E2_5654 at 6465.681 kb on + strand, within Pf6N2E2_5654 at 6465.682 kb on - strand, within Pf6N2E2_5654 at 6465.682 kb on - strand, within Pf6N2E2_5654 at 6465.682 kb on - strand, within Pf6N2E2_5654 at 6465.789 kb on + strand, within Pf6N2E2_5654 at 6465.789 kb on + strand, within Pf6N2E2_5654 at 6465.789 kb on + strand, within Pf6N2E2_5654 at 6465.789 kb on + strand, within Pf6N2E2_5654 at 6465.789 kb on + strand, within Pf6N2E2_5654 at 6465.790 kb on - strand, within Pf6N2E2_5654 at 6465.790 kb on - strand, within Pf6N2E2_5654 at 6465.790 kb on - strand, within Pf6N2E2_5654 at 6465.790 kb on - strand, within Pf6N2E2_5654 at 6465.805 kb on + strand, within Pf6N2E2_5654 at 6465.806 kb on - strand, within Pf6N2E2_5654 at 6465.849 kb on + strand, within Pf6N2E2_5654 at 6465.849 kb on + strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.850 kb on - strand, within Pf6N2E2_5654 at 6465.990 kb on + strand at 6465.991 kb on - strand at 6465.991 kb on - strand at 6465.991 kb on - strand at 6466.024 kb on - strand at 6466.072 kb on + strand at 6466.073 kb on - strand at 6466.075 kb on + strand at 6466.075 kb on + strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.076 kb on - strand at 6466.078 kb on + strand at 6466.131 kb on + strand at 6466.173 kb on + strand at 6466.173 kb on + strand at 6466.174 kb on - strand at 6466.482 kb on + strand, within Pf6N2E2_5655 at 6466.482 kb on + strand, within Pf6N2E2_5655 at 6466.509 kb on + strand, within Pf6N2E2_5655 at 6466.510 kb on - strand, within Pf6N2E2_5655 at 6466.523 kb on + strand, within Pf6N2E2_5655 at 6466.524 kb on - strand, within Pf6N2E2_5655 at 6466.524 kb on - strand, within Pf6N2E2_5655 at 6466.524 kb on - strand, within Pf6N2E2_5655 at 6466.524 kb on - strand, within Pf6N2E2_5655 at 6466.524 kb on - strand, within Pf6N2E2_5655 at 6466.562 kb on + strand, within Pf6N2E2_5655 at 6466.562 kb on + strand, within Pf6N2E2_5655 at 6466.562 kb on + strand, within Pf6N2E2_5655 at 6466.562 kb on + strand, within Pf6N2E2_5655 at 6466.563 kb on - strand, within Pf6N2E2_5655 at 6466.563 kb on - strand, within Pf6N2E2_5655 at 6466.569 kb on - strand, within Pf6N2E2_5655 at 6466.583 kb on + strand, within Pf6N2E2_5655 at 6466.583 kb on + strand, within Pf6N2E2_5655 at 6466.583 kb on + strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.584 kb on - strand, within Pf6N2E2_5655 at 6466.799 kb on + strand at 6466.799 kb on + strand at 6466.799 kb on + strand at 6466.800 kb on - strand at 6466.800 kb on - strand at 6466.800 kb on - strand at 6466.800 kb on - strand at 6466.800 kb on - strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.828 kb on + strand at 6466.829 kb on - strand at 6466.830 kb on + strand at 6466.830 kb on + strand at 6466.831 kb on - strand at 6466.831 kb on - strand at 6466.831 kb on - strand at 6466.831 kb on - strand at 6466.831 kb on - strand at 6466.861 kb on + strand at 6466.871 kb on + strand at 6466.871 kb on + strand at 6466.872 kb on - strand at 6466.872 kb on - strand at 6466.903 kb on + strand at 6466.903 kb on + strand at 6466.903 kb on + strand at 6466.903 kb on + strand at 6466.904 kb on - strand at 6466.912 kb on + strand at 6466.912 kb on + strand at 6466.912 kb on + strand at 6466.913 kb on - strand at 6466.913 kb on - strand at 6466.913 kb on - strand at 6466.913 kb on - strand at 6466.913 kb on - strand at 6466.913 kb on - strand at 6466.931 kb on + strand at 6466.939 kb on + strand at 6466.978 kb on + strand at 6466.978 kb on + strand at 6466.978 kb on + strand at 6466.978 kb on + strand at 6466.978 kb on + strand at 6466.979 kb on - strand at 6466.979 kb on - strand at 6466.979 kb on - strand at 6466.996 kb on + strand at 6466.996 kb on + strand at 6466.996 kb on + strand at 6466.997 kb on - strand at 6466.997 kb on - strand at 6466.999 kb on + strand at 6466.999 kb on + strand at 6467.000 kb on - strand at 6467.000 kb on - strand at 6467.000 kb on - strand at 6467.000 kb on - strand at 6467.000 kb on - strand at 6467.016 kb on - strand at 6467.029 kb on + strand at 6467.029 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.034 kb on + strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.035 kb on - strand at 6467.096 kb on - strand at 6467.169 kb on - strand at 6467.173 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 6,465,381 + Pf6N2E2_5654 0.33 -0.2 6,465,411 + Pf6N2E2_5654 0.36 -0.1 6,465,411 + Pf6N2E2_5654 0.36 +0.5 6,465,412 - Pf6N2E2_5654 0.36 +0.9 6,465,412 - Pf6N2E2_5654 0.36 -0.4 6,465,438 + Pf6N2E2_5654 0.39 +0.4 6,465,681 + Pf6N2E2_5654 0.63 -0.4 6,465,681 + Pf6N2E2_5654 0.63 +0.2 6,465,681 + Pf6N2E2_5654 0.63 +0.9 6,465,681 + Pf6N2E2_5654 0.63 +0.2 6,465,682 - Pf6N2E2_5654 0.63 +1.1 6,465,682 - Pf6N2E2_5654 0.63 +2.7 6,465,682 - Pf6N2E2_5654 0.63 +0.0 6,465,789 + Pf6N2E2_5654 0.74 +0.1 6,465,789 + Pf6N2E2_5654 0.74 +1.3 6,465,789 + Pf6N2E2_5654 0.74 +0.6 6,465,789 + Pf6N2E2_5654 0.74 -0.0 6,465,789 + Pf6N2E2_5654 0.74 +0.3 6,465,790 - Pf6N2E2_5654 0.74 +0.5 6,465,790 - Pf6N2E2_5654 0.74 +0.7 6,465,790 - Pf6N2E2_5654 0.74 +0.2 6,465,790 - Pf6N2E2_5654 0.74 -0.1 6,465,805 + Pf6N2E2_5654 0.76 -0.5 6,465,806 - Pf6N2E2_5654 0.76 +0.9 6,465,849 + Pf6N2E2_5654 0.80 +0.3 6,465,849 + Pf6N2E2_5654 0.80 -0.2 6,465,850 - Pf6N2E2_5654 0.80 +0.3 6,465,850 - Pf6N2E2_5654 0.80 +0.0 6,465,850 - Pf6N2E2_5654 0.80 +0.1 6,465,850 - Pf6N2E2_5654 0.80 -0.9 6,465,850 - Pf6N2E2_5654 0.80 -0.2 6,465,850 - Pf6N2E2_5654 0.80 -0.4 6,465,990 + -0.7 6,465,991 - +0.9 6,465,991 - +0.2 6,465,991 - -0.5 6,466,024 - -0.8 6,466,072 + -0.3 6,466,073 - -1.2 6,466,075 + +0.3 6,466,075 + +0.7 6,466,076 - +0.3 6,466,076 - +0.5 6,466,076 - +0.4 6,466,076 - -0.9 6,466,076 - +0.2 6,466,076 - +0.1 6,466,076 - -0.8 6,466,078 + -0.2 6,466,131 + -0.3 6,466,173 + +0.1 6,466,173 + -0.3 6,466,174 - +0.5 6,466,482 + Pf6N2E2_5655 0.40 -0.1 6,466,482 + Pf6N2E2_5655 0.40 +1.6 6,466,509 + Pf6N2E2_5655 0.46 -1.3 6,466,510 - Pf6N2E2_5655 0.46 -0.5 6,466,523 + Pf6N2E2_5655 0.49 -0.2 6,466,524 - Pf6N2E2_5655 0.49 +0.1 6,466,524 - Pf6N2E2_5655 0.49 +0.6 6,466,524 - Pf6N2E2_5655 0.49 -1.4 6,466,524 - Pf6N2E2_5655 0.49 +0.2 6,466,524 - Pf6N2E2_5655 0.49 +0.2 6,466,562 + Pf6N2E2_5655 0.58 -0.2 6,466,562 + Pf6N2E2_5655 0.58 -1.4 6,466,562 + Pf6N2E2_5655 0.58 -0.1 6,466,562 + Pf6N2E2_5655 0.58 +1.2 6,466,563 - Pf6N2E2_5655 0.58 -0.5 6,466,563 - Pf6N2E2_5655 0.58 -0.4 6,466,569 - Pf6N2E2_5655 0.59 -0.1 6,466,583 + Pf6N2E2_5655 0.62 +1.1 6,466,583 + Pf6N2E2_5655 0.62 +0.4 6,466,583 + Pf6N2E2_5655 0.62 +1.0 6,466,584 - Pf6N2E2_5655 0.62 -0.0 6,466,584 - Pf6N2E2_5655 0.62 +0.5 6,466,584 - Pf6N2E2_5655 0.62 +0.2 6,466,584 - Pf6N2E2_5655 0.62 +0.4 6,466,584 - Pf6N2E2_5655 0.62 +1.4 6,466,584 - Pf6N2E2_5655 0.62 -0.4 6,466,799 + +0.3 6,466,799 + -1.0 6,466,799 + +0.8 6,466,800 - +0.6 6,466,800 - +0.5 6,466,800 - +0.5 6,466,800 - +0.8 6,466,800 - +0.2 6,466,828 + +0.1 6,466,828 + -0.1 6,466,828 + -0.4 6,466,828 + +0.5 6,466,828 + -0.8 6,466,828 + -0.7 6,466,828 + +0.2 6,466,829 - -0.4 6,466,830 + +0.3 6,466,830 + +0.6 6,466,831 - -0.1 6,466,831 - +0.1 6,466,831 - -0.3 6,466,831 - -0.1 6,466,831 - +0.4 6,466,861 + -0.2 6,466,871 + +0.6 6,466,871 + -0.1 6,466,872 - +0.2 6,466,872 - +0.3 6,466,903 + -0.9 6,466,903 + -1.2 6,466,903 + +1.1 6,466,903 + +0.2 6,466,904 - +0.5 6,466,912 + -0.2 6,466,912 + +0.3 6,466,912 + +0.3 6,466,913 - +1.3 6,466,913 - +0.2 6,466,913 - +0.4 6,466,913 - -0.1 6,466,913 - +0.3 6,466,913 - +0.8 6,466,931 + +0.3 6,466,939 + +0.3 6,466,978 + -0.5 6,466,978 + -0.1 6,466,978 + -0.2 6,466,978 + +0.1 6,466,978 + -0.9 6,466,979 - +0.9 6,466,979 - -0.4 6,466,979 - +0.7 6,466,996 + +1.7 6,466,996 + -0.3 6,466,996 + +0.9 6,466,997 - -0.7 6,466,997 - -0.5 6,466,999 + -0.7 6,466,999 + +0.9 6,467,000 - +0.3 6,467,000 - -0.1 6,467,000 - +0.8 6,467,000 - -1.0 6,467,000 - +0.6 6,467,016 - +0.3 6,467,029 + +0.3 6,467,029 + -0.3 6,467,034 + +0.5 6,467,034 + +0.7 6,467,034 + +0.2 6,467,034 + +0.3 6,467,034 + +0.2 6,467,034 + -1.2 6,467,034 + -0.5 6,467,035 - -0.6 6,467,035 - +0.6 6,467,035 - +0.2 6,467,035 - -0.1 6,467,035 - -1.0 6,467,035 - +0.0 6,467,035 - +0.2 6,467,035 - +0.2 6,467,096 - +0.7 6,467,169 - +0.1 6,467,173 + +0.9
Or see this region's nucleotide sequence