Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20650

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
5,110,337	+				-0.5
5,110,352	+				-0.1
5,110,374	-				+1.0
5,110,378	-				+0.1
5,110,414	+				+0.4
5,110,519	+				-0.4
5,110,561	-				+0.3
5,110,565	+				+1.4
5,110,565	+				-0.3
5,110,565	+				+0.1
5,110,570	-				+0.2
5,110,575	+				-1.5
5,110,619	+		CA265_RS20645	0.12	+0.1
5,110,623	-		CA265_RS20645	0.13	-0.9
5,110,633	-		CA265_RS20645	0.15	-0.7
5,110,649	+		CA265_RS20645	0.17	-0.1
5,110,708	-		CA265_RS20645	0.28	-1.3
5,110,708	-		CA265_RS20645	0.28	+0.2
5,110,731	+		CA265_RS20645	0.32	+0.5
5,110,737	+		CA265_RS20645	0.33	+0.3
5,110,737	+		CA265_RS20645	0.33	+0.7
5,110,880	-		CA265_RS20645	0.57	+1.2
5,110,900	+		CA265_RS20645	0.61	+1.9
5,110,923	-		CA265_RS20645	0.65	-0.8
5,110,954	-		CA265_RS20645	0.70	-0.8
5,110,958	-		CA265_RS20645	0.71	-2.0
5,110,958	-		CA265_RS20645	0.71	+0.2
5,111,031	-		CA265_RS20645	0.83	-0.1
5,111,035	+		CA265_RS20645	0.84	+0.6
5,111,035	+		CA265_RS20645	0.84	-0.4
5,111,089	+				-0.0
5,111,112	-				+0.4
5,111,112	-				+0.7
5,111,114	+				-0.9
5,111,116	+				-0.3
5,111,116	+				+1.4
5,111,191	+				+1.5
5,111,218	-				+0.0
5,111,234	-				+0.3
5,111,237	+				+0.3
5,111,352	+		CA265_RS20650	0.30	-2.8
5,111,426	+		CA265_RS20650	0.59	+0.9
5,111,504	-				+0.9
5,111,506	-				-0.3
5,111,548	-				-0.2
5,111,558	-				+0.0
5,111,579	+				+0.3
5,111,580	-				+0.3
5,111,603	+				+0.3
5,111,610	-				-0.3
5,111,718	+		CA265_RS20655	0.42	-0.2
5,111,724	-		CA265_RS20655	0.44	-0.1
5,111,724	-		CA265_RS20655	0.44	-0.3
5,111,733	+		CA265_RS20655	0.48	+0.5
5,111,769	+		CA265_RS20655	0.61	+0.9
5,111,769	+		CA265_RS20655	0.61	-0.7
5,111,770	-		CA265_RS20655	0.61	+0.6
5,111,770	-		CA265_RS20655	0.61	-1.3
5,111,770	-		CA265_RS20655	0.61	+0.3
5,111,770	-		CA265_RS20655	0.61	+0.3
5,111,789	-		CA265_RS20655	0.69	+0.7
5,111,801	+		CA265_RS20655	0.73	-0.4
5,111,801	+		CA265_RS20655	0.73	+0.1
5,111,868	-				-0.1
5,111,959	+				-0.5
5,111,963	+				+0.9
5,111,964	-				+1.5
5,111,978	-				+0.0
5,111,978	-				+0.6
5,111,992	+				+0.1
5,112,025	+				+1.5
5,112,025	+				-0.3
5,112,025	+				+0.3
5,112,026	-				+0.2
5,112,245	-		CA265_RS20660	0.32	+0.0
5,112,248	-		CA265_RS20660	0.32	-0.4
5,112,307	+		CA265_RS20660	0.39	-2.1
5,112,387	-		CA265_RS20660	0.48	-0.0
5,112,421	+		CA265_RS20660	0.52	+0.1
5,112,422	-		CA265_RS20660	0.52	-0.8
5,112,490	+		CA265_RS20660	0.60	+0.5
5,112,491	-		CA265_RS20660	0.60	+1.1
5,112,491	-		CA265_RS20660	0.60	+1.7
5,112,494	+		CA265_RS20660	0.61	-1.1
5,112,495	-		CA265_RS20660	0.61	+0.2