Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19680

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
4,870,706	-				+0.1
4,870,714	-		CA265_RS19675	0.10	+0.0
4,870,714	-		CA265_RS19675	0.10	+0.1
4,870,740	-		CA265_RS19675	0.13	+0.5
4,870,795	+		CA265_RS19675	0.19	+0.5
4,870,795	+		CA265_RS19675	0.19	-0.4
4,870,796	-		CA265_RS19675	0.19	-0.4
4,870,796	-		CA265_RS19675	0.19	-1.7
4,870,842	+		CA265_RS19675	0.24	-1.5
4,870,846	+		CA265_RS19675	0.24	-0.9
4,870,906	+		CA265_RS19675	0.31	-0.9
4,870,907	-		CA265_RS19675	0.31	-0.4
4,870,907	-		CA265_RS19675	0.31	+0.8
4,870,910	+		CA265_RS19675	0.31	-0.9
4,870,910	+		CA265_RS19675	0.31	-0.3
4,870,910	+		CA265_RS19675	0.31	-0.2
4,870,911	-		CA265_RS19675	0.31	-2.1
4,870,950	+		CA265_RS19675	0.35	+0.3
4,870,950	+		CA265_RS19675	0.35	+0.0
4,870,950	+		CA265_RS19675	0.35	-2.5
4,871,136	+		CA265_RS19675	0.56	+1.9
4,871,137	-		CA265_RS19675	0.56	+0.4
4,871,137	-		CA265_RS19675	0.56	-0.2
4,871,137	-		CA265_RS19675	0.56	-0.2
4,871,140	+		CA265_RS19675	0.56	-0.6
4,871,141	-		CA265_RS19675	0.56	-0.5
4,871,187	-		CA265_RS19675	0.61	+1.0
4,871,187	-		CA265_RS19675	0.61	-0.2
4,871,220	-		CA265_RS19675	0.65	+0.2
4,871,617	-				-0.4
4,871,897	-		CA265_RS19680	0.23	+0.7
4,871,920	+		CA265_RS19680	0.25	-0.2
4,871,971	-		CA265_RS19680	0.30	-0.6
4,871,996	+		CA265_RS19680	0.33	-0.9
4,871,997	-		CA265_RS19680	0.33	+0.2
4,871,997	-		CA265_RS19680	0.33	-0.0
4,872,035	+		CA265_RS19680	0.37	+0.1
4,872,080	-		CA265_RS19680	0.42	-0.2
4,872,105	+		CA265_RS19680	0.45	+0.7
4,872,165	+		CA265_RS19680	0.51	+0.3
4,872,166	-		CA265_RS19680	0.51	+0.8
4,872,167	+		CA265_RS19680	0.51	-0.1
4,872,171	-		CA265_RS19680	0.52	+0.2
4,872,188	+		CA265_RS19680	0.54	+0.4
4,872,257	-		CA265_RS19680	0.61	+1.5
4,872,333	+		CA265_RS19680	0.69	+0.4
4,872,347	+		CA265_RS19680	0.71	-0.1
4,872,364	-		CA265_RS19680	0.73	-0.0
4,872,390	+		CA265_RS19680	0.75	+1.6
4,872,409	-		CA265_RS19680	0.77	+0.1
4,872,470	-		CA265_RS19680	0.84	-0.8
4,872,470	-		CA265_RS19680	0.84	+1.5
4,872,538	+				+0.3
4,872,569	-				-1.0
4,872,618	-				-0.2
4,872,622	+				+0.3
4,872,623	-				-0.2
4,872,665	-				-1.0
4,872,695	+				-0.7
4,872,710	+				-0.2
4,872,711	-				+0.2
4,872,711	-				+0.8
4,872,711	-				-0.9
4,872,796	+		CA265_RS19685	0.12	-0.4
4,872,801	-		CA265_RS19685	0.14	+0.4
4,872,812	+		CA265_RS19685	0.19	-0.9
4,872,818	-		CA265_RS19685	0.21	-1.1
4,872,820	-		CA265_RS19685	0.22	+0.6
4,872,842	-		CA265_RS19685	0.31	-0.0
4,872,862	+		CA265_RS19685	0.40	-0.3
4,872,863	-		CA265_RS19685	0.40	-0.1
4,872,863	-		CA265_RS19685	0.40	+0.2
4,872,950	+		CA265_RS19685	0.76	-0.9
4,872,951	-		CA265_RS19685	0.77	+0.3
4,872,968	+		CA265_RS19685	0.84	+0.7
4,872,969	-		CA265_RS19685	0.84	-0.3
4,872,990	-				+0.3
4,872,993	-				+0.3
4,872,995	+				+0.6
4,873,252	-		CA265_RS19690	0.45	+0.4
4,873,339	-		CA265_RS19690	0.64	+0.1
4,873,339	-		CA265_RS19690	0.64	-0.1
4,873,347	-		CA265_RS19690	0.65	+0.4
4,873,347	-		CA265_RS19690	0.65	+0.3
4,873,432	+		CA265_RS19690	0.84	-1.1
4,873,438	-		CA265_RS19690	0.85	+0.6
4,873,438	-		CA265_RS19690	0.85	+0.1
4,873,537	-				-0.3
4,873,541	-				+0.4
4,873,545	+				+0.4
4,873,606	+				-0.3