Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19030

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
4,733,779	+		CA265_RS19025	0.49	-4.1
4,733,846	-		CA265_RS19025	0.55	-1.4
4,733,851	+		CA265_RS19025	0.55	-1.7
4,733,906	-		CA265_RS19025	0.59	+0.6
4,733,914	+		CA265_RS19025	0.60	+0.5
4,733,953	+		CA265_RS19025	0.63	-0.5
4,733,964	+		CA265_RS19025	0.64	+1.0
4,733,992	+		CA265_RS19025	0.66	+0.4
4,734,003	-		CA265_RS19025	0.67	-0.2
4,734,112	-		CA265_RS19025	0.75	+1.2
4,734,153	-		CA265_RS19025	0.78	-0.5
4,734,153	-		CA265_RS19025	0.78	-0.5
4,734,266	+		CA265_RS19025	0.87	-1.3
4,734,269	-		CA265_RS19025	0.87	+0.2
4,734,269	-		CA265_RS19025	0.87	+0.4
4,734,332	+				-0.7
4,734,333	-				-2.3
4,734,335	-				+0.4
4,734,559	+				+1.1
4,734,563	+				+0.4
4,734,564	-				-0.9
4,734,565	+				+0.9
4,734,565	+				+0.7
4,734,565	+				+0.6
4,734,566	-				-0.4
4,734,570	+				+0.2
4,734,570	+				-0.8
4,734,574	+				+0.3
4,734,605	+				+1.0
4,734,625	+				-0.1
4,734,652	-				-1.1
4,734,697	+				-1.6
4,734,751	-		CA265_RS19030	0.17	-2.2
4,734,757	+		CA265_RS19030	0.17	-1.7
4,734,788	+		CA265_RS19030	0.21	-1.3
4,734,794	-		CA265_RS19030	0.22	-0.8
4,734,924	+		CA265_RS19030	0.39	-0.0
4,734,924	+		CA265_RS19030	0.39	+0.0
4,734,924	+		CA265_RS19030	0.39	-0.8
4,734,982	+		CA265_RS19030	0.46	-1.4
4,734,982	+		CA265_RS19030	0.46	-0.1
4,734,983	-		CA265_RS19030	0.46	+0.1
4,734,983	-		CA265_RS19030	0.46	-1.4
4,734,991	-		CA265_RS19030	0.47	-0.8
4,735,029	+		CA265_RS19030	0.52	-1.3
4,735,081	-		CA265_RS19030	0.58	-0.6
4,735,124	-		CA265_RS19030	0.64	-0.1
4,735,181	-		CA265_RS19030	0.71	-0.6
4,735,208	-		CA265_RS19030	0.74	-1.7
4,735,237	-		CA265_RS19030	0.78	+0.0
4,735,290	+		CA265_RS19030	0.85	-0.2
4,735,290	+		CA265_RS19030	0.85	+0.0
4,735,348	-				-1.0
4,735,427	+				+0.3
4,735,428	-				+0.3
4,735,505	+				+0.1
4,735,505	+				+0.1
4,735,527	+				+0.0
4,735,546	+				-0.3
4,735,591	-		CA265_RS19035	0.12	-0.1
4,735,613	-		CA265_RS19035	0.13	-0.9
4,735,620	+		CA265_RS19035	0.14	+0.8
4,735,624	+		CA265_RS19035	0.14	+0.2
4,735,625	-		CA265_RS19035	0.14	+0.1
4,735,642	+		CA265_RS19035	0.15	-0.1
4,735,675	-		CA265_RS19035	0.17	+0.5
4,735,675	-		CA265_RS19035	0.17	-0.1
4,735,716	+		CA265_RS19035	0.19	-1.9
4,735,717	-		CA265_RS19035	0.19	+1.8
4,735,719	+		CA265_RS19035	0.19	+0.2
4,735,720	-		CA265_RS19035	0.20	+0.1
4,735,726	-		CA265_RS19035	0.20	+0.8
4,735,726	-		CA265_RS19035	0.20	-0.1
4,735,748	-		CA265_RS19035	0.21	-0.0
4,735,816	-		CA265_RS19035	0.25	+0.4
4,735,819	+		CA265_RS19035	0.25	-0.3
4,735,819	+		CA265_RS19035	0.25	+0.2
4,735,829	+		CA265_RS19035	0.26	+1.2
4,735,836	+		CA265_RS19035	0.26	+0.1
4,735,942	+		CA265_RS19035	0.33	+0.7
4,735,943	-		CA265_RS19035	0.33	+0.1
4,735,944	+		CA265_RS19035	0.33	+0.3
4,735,945	-		CA265_RS19035	0.33	-0.0
4,735,945	-		CA265_RS19035	0.33	-0.0
4,735,947	+		CA265_RS19035	0.33	-1.0
4,735,948	-		CA265_RS19035	0.33	+0.3
4,735,948	-		CA265_RS19035	0.33	+0.3
4,735,951	-		CA265_RS19035	0.33	-1.4
4,735,971	+		CA265_RS19035	0.34	+0.4
4,735,976	-		CA265_RS19035	0.35	+0.3
4,735,994	+		CA265_RS19035	0.36	-0.2
4,736,001	-		CA265_RS19035	0.36	-1.9
4,736,061	+		CA265_RS19035	0.40	+0.0
4,736,062	-		CA265_RS19035	0.40	+0.1
4,736,082	-		CA265_RS19035	0.41	-0.2
4,736,258	-		CA265_RS19035	0.51	-0.1
4,736,275	+		CA265_RS19035	0.52	+0.2
4,736,276	-		CA265_RS19035	0.52	+0.7