Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16195

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
4,065,870	+		CA265_RS16190	0.43	-1.1
4,065,916	+		CA265_RS16190	0.46	-0.5
4,065,939	-		CA265_RS16190	0.48	-0.3
4,065,967	+		CA265_RS16190	0.50	+0.9
4,066,010	-		CA265_RS16190	0.53	-2.5
4,066,024	+		CA265_RS16190	0.54	-0.2
4,066,070	-		CA265_RS16190	0.58	-0.2
4,066,154	-		CA265_RS16190	0.64	-1.0
4,066,225	-		CA265_RS16190	0.70	-0.3
4,066,229	-		CA265_RS16190	0.70	+0.0
4,066,350	-		CA265_RS16190	0.79	+0.3
4,066,384	+		CA265_RS16190	0.82	+0.4
4,066,411	-		CA265_RS16190	0.84	-0.5
4,066,411	-		CA265_RS16190	0.84	-0.1
4,066,586	-				+0.3
4,066,601	+				+0.4
4,066,607	+				-0.1
4,066,642	-				-0.1
4,066,666	-				-0.2
4,066,703	+				+0.2
4,066,741	+				+0.9
4,066,741	+				-0.1
4,066,767	-				+0.3
4,066,767	-				+0.5
4,066,878	-		CA265_RS16195	0.25	+1.4
4,066,879	+		CA265_RS16195	0.25	-0.3
4,066,879	+		CA265_RS16195	0.25	-0.6
4,066,879	+		CA265_RS16195	0.25	+0.3
4,066,879	+		CA265_RS16195	0.25	+0.2
4,066,880	-		CA265_RS16195	0.25	-0.9
4,066,880	-		CA265_RS16195	0.25	+0.3
4,066,925	-		CA265_RS16195	0.37	+1.2
4,066,925	-		CA265_RS16195	0.37	+0.4
4,066,941	+		CA265_RS16195	0.42	+0.2
4,067,028	+		CA265_RS16195	0.65	+0.4
4,067,028	+		CA265_RS16195	0.65	-0.9
4,067,051	-		CA265_RS16195	0.71	+0.4
4,067,063	-		CA265_RS16195	0.74	+0.4
4,067,063	-		CA265_RS16195	0.74	+1.7
4,067,080	+		CA265_RS16195	0.78	+0.6
4,067,161	+				-0.4
4,067,162	-				+0.7
4,067,184	+				-0.5
4,067,185	-				+0.3
4,067,216	-		CA265_RS16200	0.13	+0.3
4,067,291	+		CA265_RS16200	0.31	+0.1
4,067,371	+		CA265_RS16200	0.50	+3.8
4,067,372	-		CA265_RS16200	0.50	+0.1
4,067,376	+		CA265_RS16200	0.51	+0.3
4,067,393	-		CA265_RS16200	0.55	+0.1
4,067,422	+		CA265_RS16200	0.62	+0.0
4,067,422	+		CA265_RS16200	0.62	-0.5
4,067,423	-		CA265_RS16200	0.63	-0.1
4,067,423	-		CA265_RS16200	0.63	-1.0
4,067,424	+		CA265_RS16200	0.63	-0.2
4,067,425	-		CA265_RS16200	0.63	-0.1
4,067,425	-		CA265_RS16200	0.63	+0.1
4,067,559	-				-0.6
4,067,628	+		CA265_RS16205	0.11	+0.2
4,067,629	-		CA265_RS16205	0.11	+0.8
4,067,761	+		CA265_RS16205	0.43	-0.8
4,067,762	-		CA265_RS16205	0.43	+0.9
4,067,762	-		CA265_RS16205	0.43	-0.5
4,067,824	-		CA265_RS16205	0.58	+0.6
4,067,825	+		CA265_RS16205	0.59	-0.2
4,067,829	+		CA265_RS16205	0.60	+0.9
4,067,867	+		CA265_RS16205	0.69	-0.6
4,067,902	+		CA265_RS16205	0.77	+0.1
4,067,964	+				+1.0
4,067,965	-				+0.2
4,067,968	-				-1.9
4,067,985	-				+0.7
4,068,074	+				+0.2
4,068,075	-				+0.4
4,068,075	-				-0.2
4,068,075	-				-0.5
4,068,118	-				+2.7
4,068,146	+				-0.2
4,068,148	+				-0.3
4,068,148	+				-0.5
4,068,148	+				-2.5
4,068,149	-				-0.7
4,068,149	-				-0.2
4,068,149	-				+0.1
4,068,152	+				+0.5