Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15245

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,833,411	+				-0.1
3,833,411	+				+1.2
3,833,448	+				-0.1
3,833,451	+				+0.1
3,833,452	-				-0.2
3,833,474	+				-1.0
3,833,480	-				-0.1
3,833,534	-				+0.9
3,833,536	-				-1.4
3,833,536	-				+0.1
3,833,615	-				-0.7
3,833,625	-				+0.5
3,833,726	+		CA265_RS15245	0.12	-1.2
3,833,887	-		CA265_RS15245	0.33	+0.1
3,833,955	+		CA265_RS15245	0.42	-2.7
3,833,955	+		CA265_RS15245	0.42	+0.1
3,834,200	-		CA265_RS15245	0.74	-0.7
3,834,200	-		CA265_RS15245	0.74	-0.4
3,834,209	+		CA265_RS15245	0.75	-0.9
3,834,210	-		CA265_RS15245	0.75	-2.3
3,834,210	-		CA265_RS15245	0.75	-0.3
3,834,277	-		CA265_RS15245	0.84	-0.4
3,834,298	-		CA265_RS15245	0.87	-1.0
3,834,376	+				-0.2
3,834,435	-				-0.4
3,834,492	+				+0.5
3,834,494	+				-1.0
3,834,872	+		CA265_RS15250	0.34	-0.9
3,834,874	+		CA265_RS15250	0.34	-0.9
3,834,874	+		CA265_RS15250	0.34	-0.6
3,834,874	+		CA265_RS15250	0.34	+0.2
3,834,874	+		CA265_RS15250	0.34	-0.5
3,834,954	+		CA265_RS15250	0.42	+0.3
3,834,959	+		CA265_RS15250	0.42	-0.0
3,834,968	+		CA265_RS15250	0.43	+0.8
3,834,985	-		CA265_RS15250	0.44	-1.4
3,835,032	-		CA265_RS15250	0.49	-1.1
3,835,083	-		CA265_RS15250	0.53	+0.0
3,835,107	+		CA265_RS15250	0.55	-0.2
3,835,200	+		CA265_RS15250	0.64	-1.9
3,835,201	-		CA265_RS15250	0.64	-1.7
3,835,209	-		CA265_RS15250	0.65	-0.9
3,835,241	+		CA265_RS15250	0.67	-3.3
3,835,241	+		CA265_RS15250	0.67	-1.8
3,835,241	+		CA265_RS15250	0.67	-1.0
3,835,266	+		CA265_RS15250	0.70	-0.7
3,835,272	+		CA265_RS15250	0.70	-0.7
3,835,274	+		CA265_RS15250	0.70	+0.2
3,835,371	+		CA265_RS15250	0.79	-0.1