Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14615

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,679,871	-		CA265_RS14610	0.46	-0.3
3,679,874	-		CA265_RS14610	0.46	+0.1
3,679,921	+		CA265_RS14610	0.49	-1.3
3,679,992	-		CA265_RS14610	0.54	+0.4
3,680,047	-		CA265_RS14610	0.57	+0.1
3,680,060	+		CA265_RS14610	0.58	-0.2
3,680,102	+		CA265_RS14610	0.60	-0.2
3,680,102	+		CA265_RS14610	0.60	+0.3
3,680,115	-		CA265_RS14610	0.61	+0.3
3,680,137	+		CA265_RS14610	0.62	+0.3
3,680,248	+		CA265_RS14610	0.69	+0.3
3,680,249	-		CA265_RS14610	0.69	-0.7
3,680,410	-		CA265_RS14610	0.78	-0.7
3,680,431	+		CA265_RS14610	0.80	+0.2
3,680,588	-		CA265_RS14610	0.89	+0.4
3,680,633	+				+0.5
3,680,739	+				-0.1
3,680,740	-				+0.3
3,680,805	-				+0.2
3,680,805	-				-0.2
3,680,807	+				+0.4
3,680,807	+				-0.6
3,680,861	-		CA265_RS14615	0.15	-0.4
3,680,883	+		CA265_RS14615	0.27	-0.1
3,680,890	+		CA265_RS14615	0.31	-1.6
3,680,919	-		CA265_RS14615	0.47	-0.5
3,680,963	+		CA265_RS14615	0.72	-0.7
3,680,969	+		CA265_RS14615	0.75	-1.5
3,680,970	-		CA265_RS14615	0.76	+0.6
3,681,017	-				-0.6
3,681,019	-				-1.1
3,681,023	+				+0.1
3,681,024	-				+0.6
3,681,062	+				-0.0
3,681,062	+				+1.4
3,681,072	-		CA265_RS14620	0.10	-0.2
3,681,078	-		CA265_RS14620	0.11	+0.3
3,681,094	-		CA265_RS14620	0.15	+1.0
3,681,159	+		CA265_RS14620	0.28	-0.0
3,681,210	-		CA265_RS14620	0.39	+0.0
3,681,215	-		CA265_RS14620	0.40	-0.5
3,681,289	-		CA265_RS14620	0.56	+1.3
3,681,289	-		CA265_RS14620	0.56	+0.1
3,681,338	+		CA265_RS14620	0.66	+0.3
3,681,476	-				-0.2
3,681,479	+				-0.0
3,681,564	-		CA265_RS14625	0.10	-2.0
3,681,564	-		CA265_RS14625	0.10	-1.8
3,681,564	-		CA265_RS14625	0.10	-1.8
3,681,583	-		CA265_RS14625	0.14	-1.9
3,681,583	-		CA265_RS14625	0.14	-2.6
3,681,618	-		CA265_RS14625	0.19	-1.6
3,681,621	-		CA265_RS14625	0.20	-2.0
3,681,624	+		CA265_RS14625	0.20	-1.7
3,681,641	+		CA265_RS14625	0.23	-2.0
3,681,705	-		CA265_RS14625	0.34	-2.5
3,681,726	-		CA265_RS14625	0.37	-2.0
3,681,730	-		CA265_RS14625	0.38	-1.3
3,681,730	-		CA265_RS14625	0.38	-2.4
3,681,797	-		CA265_RS14625	0.49	-1.7
3,681,810	+		CA265_RS14625	0.51	-2.2
3,681,819	-		CA265_RS14625	0.53	-1.1
3,681,822	+		CA265_RS14625	0.53	-1.8
3,681,855	-		CA265_RS14625	0.59	-1.1
3,681,871	+		CA265_RS14625	0.61	-1.6
3,681,877	+		CA265_RS14625	0.62	+0.2
3,681,880	-		CA265_RS14625	0.63	-1.5
3,681,926	+		CA265_RS14625	0.71	-0.9
3,681,927	-		CA265_RS14625	0.71	-1.7
3,681,928	+		CA265_RS14625	0.71	-1.6
3,681,928	+		CA265_RS14625	0.71	-1.9
3,681,928	+		CA265_RS14625	0.71	-1.5
3,681,928	+		CA265_RS14625	0.71	-4.0
3,681,928	+		CA265_RS14625	0.71	-2.4
3,681,932	+		CA265_RS14625	0.72	-2.2
3,681,989	-		CA265_RS14625	0.81	-1.8
3,681,990	-		CA265_RS14625	0.81	-3.1
3,681,990	-		CA265_RS14625	0.81	-1.3
3,681,993	+		CA265_RS14625	0.82	-1.9
3,681,994	-		CA265_RS14625	0.82	+1.1