Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13240

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,289,885	+		CA265_RS13235	0.19	-1.5
3,289,890	-		CA265_RS13235	0.20	-0.0
3,289,934	-		CA265_RS13235	0.25	+0.3
3,289,934	-		CA265_RS13235	0.25	+0.5
3,289,954	+		CA265_RS13235	0.27	-1.1
3,290,056	+		CA265_RS13235	0.39	-2.0
3,290,089	+		CA265_RS13235	0.43	-0.2
3,290,090	-		CA265_RS13235	0.43	-0.5
3,290,172	-		CA265_RS13235	0.53	-0.8
3,290,265	-		CA265_RS13235	0.63	-1.4
3,290,345	-		CA265_RS13235	0.73	-0.2
3,290,345	-		CA265_RS13235	0.73	-0.3
3,290,465	+		CA265_RS13235	0.87	-0.2
3,290,466	-		CA265_RS13235	0.87	+0.5
3,290,471	+		CA265_RS13235	0.87	+0.8
3,290,477	+		CA265_RS13235	0.88	-1.0
3,290,522	-				-1.5
3,290,558	-				+0.3
3,290,560	-				-0.5
3,290,624	-				-0.6
3,290,702	-				-0.1
3,290,733	-				-0.1
3,290,786	+				+2.3
3,290,787	-				-0.5
3,291,025	+		CA265_RS13240	0.74	+0.6
3,291,055	-		CA265_RS13240	0.83	-1.4
3,291,070	-		CA265_RS13240	0.88	-1.2
3,291,092	-				+1.5
3,291,113	+				-0.4
3,291,114	-				+0.6
3,291,117	+				+0.3
3,291,196	+				+0.0
3,291,252	+		CA265_RS13245	0.17	+0.0
3,291,252	+		CA265_RS13245	0.17	+0.5
3,291,252	+		CA265_RS13245	0.17	-0.7
3,291,253	-		CA265_RS13245	0.18	+0.7
3,291,271	-		CA265_RS13245	0.22	+0.0
3,291,290	-		CA265_RS13245	0.26	+0.3
3,291,294	+		CA265_RS13245	0.27	-0.2
3,291,294	+		CA265_RS13245	0.27	-1.3
3,291,349	-		CA265_RS13245	0.39	-0.2
3,291,394	-		CA265_RS13245	0.48	+0.4
3,291,442	+		CA265_RS13245	0.59	-0.7
3,291,508	-		CA265_RS13245	0.73	+0.1
3,291,522	+		CA265_RS13245	0.76	+0.1
3,291,568	-		CA265_RS13245	0.86	+0.7
3,291,634	+				-0.2