Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13085

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,258,433	-		CA265_RS13080	0.30	-0.2
3,258,528	-		CA265_RS13080	0.38	-1.0
3,258,528	-		CA265_RS13080	0.38	+0.6
3,258,561	-		CA265_RS13080	0.41	-0.0
3,258,627	+		CA265_RS13080	0.47	-1.0
3,258,628	-		CA265_RS13080	0.47	+0.7
3,258,628	-		CA265_RS13080	0.47	-2.0
3,258,628	-		CA265_RS13080	0.47	+0.5
3,258,671	-		CA265_RS13080	0.51	+0.3
3,258,684	+		CA265_RS13080	0.52	-0.5
3,258,684	+		CA265_RS13080	0.52	+0.7
3,258,684	+		CA265_RS13080	0.52	-0.1
3,258,684	+		CA265_RS13080	0.52	-0.1
3,258,685	-		CA265_RS13080	0.52	-0.6
3,258,685	-		CA265_RS13080	0.52	-0.5
3,258,714	-		CA265_RS13080	0.54	-1.5
3,258,716	+		CA265_RS13080	0.54	+1.3
3,258,719	+		CA265_RS13080	0.55	-0.3
3,258,720	-		CA265_RS13080	0.55	-0.3
3,258,773	-		CA265_RS13080	0.59	+0.3
3,258,795	-		CA265_RS13080	0.61	-0.3
3,258,795	-		CA265_RS13080	0.61	-0.1
3,258,902	+		CA265_RS13080	0.70	+0.3
3,258,902	+		CA265_RS13080	0.70	-0.6
3,258,902	+		CA265_RS13080	0.70	+0.5
3,258,914	-		CA265_RS13080	0.71	-0.1
3,259,064	-		CA265_RS13080	0.84	-0.8
3,259,064	-		CA265_RS13080	0.84	-0.4
3,259,087	-		CA265_RS13080	0.86	+0.8
3,259,088	+		CA265_RS13080	0.86	-0.3
3,259,088	+		CA265_RS13080	0.86	-0.8
3,259,088	+		CA265_RS13080	0.86	+1.2
3,259,088	+		CA265_RS13080	0.86	+0.3
3,259,089	-		CA265_RS13080	0.86	+1.6
3,259,159	+				+0.0
3,259,165	-				-0.1
3,259,165	-				-0.4
3,259,165	-				-0.4
3,259,215	-				-0.5
3,259,254	+				-0.0
3,259,255	-				-0.7
3,259,259	+				-0.1
3,259,259	+				+0.5
3,259,260	-				-0.4
3,259,281	-				+0.2
3,259,281	-				-0.2
3,259,410	-		CA265_RS13085	0.17	-0.7
3,259,531	+		CA265_RS13085	0.46	-0.1
3,259,545	+		CA265_RS13085	0.49	-0.3
3,259,545	+		CA265_RS13085	0.49	-1.3
3,259,580	-				+1.3
3,259,580	-		CA265_RS13085	0.57	-0.5
3,259,585	+		CA265_RS13085	0.59	+0.4
3,259,722	+				-0.1
3,259,750	+				-0.1
3,259,775	-				-1.7
3,259,778	-				+0.2
3,259,838	-				+0.5
3,260,660	-				+0.1
3,260,723	+				+0.1