Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12720

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,170,419	+		CA265_RS12715	0.45	+0.3
3,170,420	-		CA265_RS12715	0.46	-0.3
3,170,484	-		CA265_RS12715	0.51	-0.3
3,170,486	+		CA265_RS12715	0.51	-2.5
3,170,501	-		CA265_RS12715	0.53	+0.1
3,170,515	+		CA265_RS12715	0.54	-1.1
3,170,522	-		CA265_RS12715	0.54	-0.4
3,170,561	+		CA265_RS12715	0.58	-0.3
3,170,595	+		CA265_RS12715	0.61	+1.0
3,170,600	-		CA265_RS12715	0.61	-2.0
3,170,687	-		CA265_RS12715	0.69	+0.5
3,170,774	+		CA265_RS12715	0.77	-0.8
3,170,774	+		CA265_RS12715	0.77	-0.5
3,170,774	+		CA265_RS12715	0.77	+0.3
3,170,775	-		CA265_RS12715	0.77	+0.2
3,170,940	-				-0.6
3,170,993	-				-0.4
3,170,993	-				-0.7
3,171,021	+				-1.7
3,171,021	+				+0.4
3,171,061	-				-0.5
3,171,181	+				-0.2
3,171,270	+				-0.2
3,171,271	-				-0.2
3,171,286	+				-0.1
3,171,362	+				+0.2
3,171,369	-				-0.9
3,171,410	-				-0.3
3,171,410	-				-1.5
3,171,410	-				-1.6
3,171,497	+		CA265_RS12720	0.12	-1.2
3,171,497	+		CA265_RS12720	0.12	-0.7
3,171,530	-		CA265_RS12720	0.16	-1.6
3,171,565	-		CA265_RS12720	0.21	+1.9
3,171,613	-		CA265_RS12720	0.27	-0.7
3,171,618	-		CA265_RS12720	0.27	+0.0
3,171,643	+		CA265_RS12720	0.30	+0.2
3,171,710	+		CA265_RS12720	0.39	+0.4
3,171,711	-		CA265_RS12720	0.39	+0.7
3,171,734	+		CA265_RS12720	0.42	-0.3
3,171,745	+		CA265_RS12720	0.43	-1.7
3,171,746	-		CA265_RS12720	0.43	-0.6
3,171,764	-		CA265_RS12720	0.45	-1.1
3,171,780	+		CA265_RS12720	0.47	-0.7
3,171,901	-		CA265_RS12720	0.62	-0.5
3,172,017	+		CA265_RS12720	0.77	-1.3
3,172,042	-		CA265_RS12720	0.80	-1.2
3,172,096	+		CA265_RS12720	0.86	+0.5
3,172,167	-				+0.1
3,172,195	-				+0.1
3,172,202	+				-0.4
3,172,203	-				-0.4
3,172,266	+		CA265_RS12725	0.13	-0.9
3,172,330	-		CA265_RS12725	0.25	-0.7
3,172,398	+		CA265_RS12725	0.38	-0.5
3,172,420	+		CA265_RS12725	0.42	+0.1
3,172,561	-		CA265_RS12725	0.68	-0.6
3,172,561	-		CA265_RS12725	0.68	-0.4
3,172,561	-		CA265_RS12725	0.68	-0.1
3,172,593	+		CA265_RS12725	0.74	-0.3
3,172,611	+		CA265_RS12725	0.77	+0.4
3,172,611	+		CA265_RS12725	0.77	+0.2
3,172,612	-		CA265_RS12725	0.78	-1.3
3,172,650	+		CA265_RS12725	0.85	-0.5
3,172,725	+				-0.4
3,172,726	-				-0.5
3,172,765	+				+0.1
3,172,766	-				-0.4
3,172,864	+				+0.8
3,172,865	-				+0.1
3,172,865	-				-0.3
3,172,905	-				-0.3
3,172,905	-				+1.0
3,172,919	+				-0.2
3,172,919	+				+0.2
3,172,923	+				+0.1
3,172,923	+				-0.2
3,172,924	-				-0.2
3,172,932	+				-0.4
3,172,933	-				-0.6
3,172,934	+				+0.0
3,173,009	-				-0.2
3,173,012	+				-0.0
3,173,015	+				-0.6
3,173,072	+				+1.1
3,173,096	-				+0.1
3,173,096	-				-0.2
3,173,111	-				+0.2
3,173,114	+				-0.3
3,173,114	+				-1.4
3,173,115	-				-0.3
3,173,123	+				+0.1
3,173,123	+				-0.6
3,173,124	-				-0.4
3,173,126	-				-0.3
3,173,156	+				-0.1
3,173,157	-				+0.1