Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10660

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,633,318	-		CA265_RS10650	0.17	-0.1
2,633,320	+		CA265_RS10650	0.18	-0.4
2,633,363	+		CA265_RS10650	0.27	-1.4
2,633,363	+		CA265_RS10650	0.27	-0.3
2,633,364	-		CA265_RS10650	0.28	-0.2
2,633,368	+		CA265_RS10650	0.28	+0.5
2,633,380	+		CA265_RS10650	0.31	-0.8
2,633,381	-		CA265_RS10650	0.31	+0.8
2,633,381	-		CA265_RS10650	0.31	+0.3
2,633,412	-		CA265_RS10650	0.38	-0.5
2,633,493	+		CA265_RS10650	0.56	-0.4
2,633,495	+		CA265_RS10650	0.57	-0.1
2,633,553	-		CA265_RS10650	0.70	-0.8
2,633,554	+		CA265_RS10650	0.70	+0.5
2,633,555	-		CA265_RS10650	0.70	-0.4
2,633,609	+		CA265_RS10650	0.82	+0.2
2,633,617	-		CA265_RS10650	0.84	+0.1
2,633,716	-				+0.6
2,633,758	+		CA265_RS10655	0.10	-0.5
2,633,767	+		CA265_RS10655	0.12	-0.2
2,633,832	+		CA265_RS10655	0.22	+0.2
2,633,917	-		CA265_RS10655	0.36	-0.1
2,633,932	-		CA265_RS10655	0.38	+0.3
2,633,933	+		CA265_RS10655	0.38	+0.4
2,634,054	+		CA265_RS10655	0.57	+1.2
2,634,086	+		CA265_RS10655	0.63	+0.7
2,634,109	+		CA265_RS10655	0.66	-0.2
2,634,109	+		CA265_RS10655	0.66	-0.4
2,634,110	-		CA265_RS10655	0.66	+0.5
2,634,110	-		CA265_RS10655	0.66	-0.6
2,634,110	-		CA265_RS10655	0.66	-0.9
2,634,110	-		CA265_RS10655	0.66	-0.9
2,634,197	-		CA265_RS10655	0.80	+0.2
2,634,294	+				-0.2
2,634,295	-				+0.4
2,634,331	+				-0.1
2,634,386	-		CA265_RS10660	0.20	+2.5
2,634,389	+		CA265_RS10660	0.21	+0.3
2,634,624	-		CA265_RS10660	0.72	+0.0
2,634,638	+		CA265_RS10660	0.75	+0.3
2,634,682	+		CA265_RS10660	0.84	+0.2
2,634,717	+				+0.3
2,634,743	-				+0.6
2,634,764	-				+0.0
2,634,812	+				-0.8
2,634,812	+				+0.1
2,634,818	+				+0.4
2,634,819	-				+0.4
2,635,008	+		CA265_RS10665	0.30	+0.2
2,635,015	-		CA265_RS10665	0.31	+0.6
2,635,015	-		CA265_RS10665	0.31	+0.2
2,635,017	+		CA265_RS10665	0.32	+0.5
2,635,017	+		CA265_RS10665	0.32	+0.1
2,635,032	-		CA265_RS10665	0.34	-0.2
2,635,101	+		CA265_RS10665	0.46	-0.2
2,635,101	+		CA265_RS10665	0.46	-0.0
2,635,102	-		CA265_RS10665	0.46	-0.4
2,635,224	+		CA265_RS10665	0.67	+0.1
2,635,225	-		CA265_RS10665	0.67	-1.4
2,635,255	-		CA265_RS10665	0.72	+0.6
2,635,323	+		CA265_RS10665	0.83	-0.3
2,635,348	-		CA265_RS10665	0.88	-0.4
2,635,415	+				+1.2
2,635,487	-				-0.4
2,635,493	-				-0.6
2,635,537	-				+1.0
2,635,557	-				+0.2
2,635,563	+				+0.1
2,635,602	+				-0.2
2,635,682	+				+0.5
2,635,746	+				+0.9