Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10150

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,494,729	-				+0.2
2,494,730	+				-2.0
2,494,730	+				-0.9
2,494,730	+				-1.6
2,494,731	-				+1.7
2,494,731	-				+0.0
2,494,797	+				-0.4
2,494,801	-				-0.6
2,495,031	-		CA265_RS10140	0.25	-0.2
2,495,040	+		CA265_RS10140	0.28	+0.8
2,495,040	+		CA265_RS10140	0.28	-0.4
2,495,091	+		CA265_RS10140	0.44	-0.4
2,495,104	+		CA265_RS10140	0.48	-1.7
2,495,105	-		CA265_RS10140	0.48	-0.5
2,495,227	-		CA265_RS10140	0.86	+1.0
2,495,227	-		CA265_RS10140	0.86	+0.1
2,495,245	+				-0.6
2,495,257	+				-0.2
2,495,257	+				-0.6
2,495,314	-				-0.2
2,495,317	+				-0.9
2,495,350	-		CA265_RS10145	0.17	-0.2
2,495,375	+		CA265_RS10145	0.23	-2.0
2,495,375	+		CA265_RS10145	0.23	-0.6
2,495,375	+		CA265_RS10145	0.23	-0.9
2,495,376	-		CA265_RS10145	0.23	+0.9
2,495,409	+		CA265_RS10145	0.32	+0.5
2,495,409	+		CA265_RS10145	0.32	-0.4
2,495,413	+		CA265_RS10145	0.33	+0.3
2,495,487	+		CA265_RS10145	0.52	-1.9
2,495,488	-		CA265_RS10145	0.52	-0.5
2,495,492	-		CA265_RS10145	0.53	+0.3
2,495,492	-		CA265_RS10145	0.53	-0.8
2,495,499	+		CA265_RS10145	0.55	-0.3
2,495,499	+		CA265_RS10145	0.55	-0.9
2,495,500	-		CA265_RS10145	0.55	-0.2
2,495,500	-		CA265_RS10145	0.55	-0.6
2,495,511	+		CA265_RS10145	0.58	+0.1
2,495,570	+		CA265_RS10145	0.73	-0.2
2,495,571	-		CA265_RS10145	0.73	-0.8
2,495,594	+		CA265_RS10145	0.79	-0.1
2,495,595	-		CA265_RS10145	0.79	+0.2
2,495,672	+				-0.6
2,495,706	+				-1.4
2,495,874	-		CA265_RS10150	0.22	-1.1
2,495,921	-		CA265_RS10150	0.27	-2.5
2,496,127	+		CA265_RS10150	0.51	-0.7
2,496,128	-		CA265_RS10150	0.51	-1.9
2,496,194	-		CA265_RS10150	0.58	-2.8
2,496,261	-		CA265_RS10150	0.66	-1.0
2,496,303	+		CA265_RS10150	0.71	-2.0
2,496,309	-				-1.6
2,496,416	+		CA265_RS10150	0.84	-0.5
2,496,547	-				-0.9
2,496,558	-				-2.0
2,496,562	+				-1.7
2,496,567	+				+1.2
2,496,568	-				-0.2
2,496,571	+				-0.5
2,496,638	+				-2.7
2,496,647	+				-1.0
2,496,672	-		CA265_RS10155	0.13	-1.7
2,496,702	+		CA265_RS10155	0.16	-1.1
2,496,703	-		CA265_RS10155	0.16	-2.5
2,496,705	+		CA265_RS10155	0.17	-0.4
2,496,883	+		CA265_RS10155	0.38	-0.6
2,496,893	+		CA265_RS10155	0.40	-2.4
2,496,918	-		CA265_RS10155	0.43	-0.5
2,496,948	+		CA265_RS10155	0.46	-1.3
2,496,966	+		CA265_RS10155	0.49	-2.5
2,496,967	-		CA265_RS10155	0.49	-0.9
2,496,986	+		CA265_RS10155	0.51	-1.9
2,497,098	-		CA265_RS10155	0.65	-2.5
2,497,119	+				+1.2
2,497,120	-		CA265_RS10155	0.68	-0.6
2,497,191	-		CA265_RS10155	0.76	-0.9
2,497,196	-		CA265_RS10155	0.77	-1.6
2,497,196	-		CA265_RS10155	0.77	-1.3
2,497,221	-		CA265_RS10155	0.80	-1.3
2,497,223	-		CA265_RS10155	0.80	-0.9
2,497,231	-		CA265_RS10155	0.81	-0.8
2,497,252	-		CA265_RS10155	0.84	-1.1
2,497,278	+		CA265_RS10155	0.87	-0.4
2,497,294	+		CA265_RS10155	0.89	-1.4
2,497,329	-				-1.9
2,497,382	+				-0.1
2,497,393	+				-2.3
2,497,419	+				-1.3
2,497,420	-				-0.4
2,497,423	+				-1.3
2,497,423	+				-1.3
2,497,492	-				+0.5