Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07515

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
1,892,828	-				+0.1
1,892,913	+				-0.2
1,892,920	+				-0.4
1,892,922	+				-0.3
1,892,963	+				-0.5
1,893,051	-				+0.0
1,893,058	-				-0.1
1,893,059	+				-1.3
1,893,060	-				+0.6
1,893,101	-				+0.1
1,893,208	+				+0.2
1,893,237	-				-0.5
1,893,252	-				-0.4
1,893,276	+				-1.2
1,893,331	+				-0.5
1,893,332	-				-0.6
1,893,483	-				+0.2
1,893,524	+				-0.2
1,893,525	-				+0.0
1,893,552	+				-1.2
1,893,628	+				-0.3
1,893,629	-				-0.2
1,893,631	-				+0.2
1,893,637	-				-0.3
1,893,649	+				+0.4
1,893,649	+				+0.1
1,893,650	-				+0.2
1,893,658	+				-0.3
1,893,720	-				-0.6
1,893,728	+				-1.3
1,893,749	+				-0.9
1,893,750	-				+0.4
1,893,802	+				-1.6
1,893,803	-				-0.2
1,893,803	-				+0.4
1,893,836	+		CA265_RS07515	0.11	-0.8
1,893,836	+		CA265_RS07515	0.11	-1.5
1,893,837	-		CA265_RS07515	0.11	-0.4
1,893,859	-		CA265_RS07515	0.13	-0.5
1,894,136	-		CA265_RS07515	0.37	-0.8
1,894,167	+		CA265_RS07515	0.40	-0.2
1,894,167	+		CA265_RS07515	0.40	-0.5
1,894,172	+		CA265_RS07515	0.40	-1.6
1,894,214	+		CA265_RS07515	0.44	-0.1
1,894,238	-		CA265_RS07515	0.46	-2.0
1,894,238	-		CA265_RS07515	0.46	-0.6
1,894,256	-		CA265_RS07515	0.48	-0.2
1,894,309	+		CA265_RS07515	0.52	-1.3
1,894,311	+		CA265_RS07515	0.52	+0.0
1,894,312	-		CA265_RS07515	0.52	-0.8
1,894,315	+		CA265_RS07515	0.53	-0.5
1,894,315	+		CA265_RS07515	0.53	-0.5
1,894,363	+		CA265_RS07515	0.57	+0.4
1,894,364	-		CA265_RS07515	0.57	-0.0
1,894,409	+		CA265_RS07515	0.61	-0.8
1,894,481	-		CA265_RS07515	0.67	+0.2
1,894,527	+		CA265_RS07515	0.71	-0.8
1,894,644	+		CA265_RS07515	0.81	+0.3
1,894,645	-		CA265_RS07515	0.82	-0.6
1,894,645	-		CA265_RS07515	0.82	-0.4
1,894,727	-		CA265_RS07515	0.89	-1.6
1,894,859	-				-1.0
1,894,917	+				-0.7
1,894,969	+				+0.7
1,895,127	-		CA265_RS07520	0.11	-0.1
1,895,150	+		CA265_RS07520	0.13	+0.2
1,895,159	+		CA265_RS07520	0.14	-0.0
1,895,159	+		CA265_RS07520	0.14	-0.7
1,895,159	+		CA265_RS07520	0.14	-1.1
1,895,159	+		CA265_RS07520	0.14	-0.0
1,895,160	-		CA265_RS07520	0.14	+0.1
1,895,180	-		CA265_RS07520	0.16	-0.2
1,895,182	-		CA265_RS07520	0.16	-0.1
1,895,188	+		CA265_RS07520	0.17	-0.4
1,895,188	+		CA265_RS07520	0.17	-0.7
1,895,189	-		CA265_RS07520	0.17	-0.2
1,895,189	-		CA265_RS07520	0.17	-0.3
1,895,197	-		CA265_RS07520	0.18	+0.1
1,895,363	+		CA265_RS07520	0.34	-0.7
1,895,482	+		CA265_RS07520	0.47	-0.7
1,895,513	+		CA265_RS07520	0.50	+0.0
1,895,532	+		CA265_RS07520	0.52	-0.2
1,895,533	-		CA265_RS07520	0.52	+0.4
1,895,552	+		CA265_RS07520	0.54	+1.0
1,895,553	-		CA265_RS07520	0.54	+0.0
1,895,575	+		CA265_RS07520	0.56	-0.6
1,895,596	-		CA265_RS07520	0.58	+0.6
1,895,729	-		CA265_RS07520	0.72	+0.3
1,895,748	-		CA265_RS07520	0.73	+0.1
1,895,855	+		CA265_RS07520	0.84	-0.7