Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31265 and AZOBR_RS31270 are separated by 264 nucleotides AZOBR_RS31270 and AZOBR_RS31275 are separated by 41 nucleotides
AZOBR_RS31265: AZOBR_RS31265 - lysophospholipase, at 380,094 to 381,314
_RS31265
AZOBR_RS31270: AZOBR_RS31270 - aldose 1-epimerase, at 381,579 to 382,652
_RS31270
AZOBR_RS31275: AZOBR_RS31275 - altronate oxidoreductase, at 382,694 to 384,199
_RS31275
Position (kb) 381
382
383 Strain fitness (log2 ratio) -1
0
1 at 380.738 kb on - strand, within AZOBR_RS31265 at 380.738 kb on - strand, within AZOBR_RS31265 at 380.783 kb on - strand, within AZOBR_RS31265 at 380.818 kb on + strand, within AZOBR_RS31265 at 380.818 kb on + strand, within AZOBR_RS31265 at 380.818 kb on + strand, within AZOBR_RS31265 at 380.818 kb on + strand, within AZOBR_RS31265 at 380.818 kb on + strand, within AZOBR_RS31265 at 380.819 kb on - strand, within AZOBR_RS31265 at 380.819 kb on - strand, within AZOBR_RS31265 at 380.819 kb on - strand, within AZOBR_RS31265 at 381.040 kb on + strand, within AZOBR_RS31265 at 381.085 kb on + strand, within AZOBR_RS31265 at 381.085 kb on + strand, within AZOBR_RS31265 at 381.086 kb on - strand, within AZOBR_RS31265 at 381.086 kb on - strand, within AZOBR_RS31265 at 381.175 kb on + strand, within AZOBR_RS31265 at 381.176 kb on - strand, within AZOBR_RS31265 at 381.178 kb on + strand, within AZOBR_RS31265 at 381.178 kb on + strand, within AZOBR_RS31265 at 381.256 kb on + strand at 381.256 kb on + strand at 381.256 kb on + strand at 381.256 kb on + strand at 381.256 kb on + strand at 381.256 kb on + strand at 381.257 kb on - strand at 381.257 kb on - strand at 381.257 kb on - strand at 381.257 kb on - strand at 381.257 kb on - strand at 381.589 kb on - strand at 381.693 kb on + strand, within AZOBR_RS31270 at 381.694 kb on - strand, within AZOBR_RS31270 at 381.763 kb on - strand, within AZOBR_RS31270 at 381.822 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 382.335 kb on + strand, within AZOBR_RS31270 at 382.456 kb on - strand, within AZOBR_RS31270 at 382.456 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.573 kb on + strand at 382.573 kb on + strand at 382.573 kb on + strand at 382.614 kb on + strand at 382.615 kb on - strand at 382.931 kb on + strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.121 kb on - strand, within AZOBR_RS31275 at 383.379 kb on - strand, within AZOBR_RS31275 at 383.420 kb on + strand, within AZOBR_RS31275
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 380,738 - AZOBR_RS31265 0.53 -0.9 380,738 - AZOBR_RS31265 0.53 -0.2 380,783 - AZOBR_RS31265 0.56 -0.0 380,818 + AZOBR_RS31265 0.59 -0.2 380,818 + AZOBR_RS31265 0.59 -0.1 380,818 + AZOBR_RS31265 0.59 -0.2 380,818 + AZOBR_RS31265 0.59 +0.1 380,818 + AZOBR_RS31265 0.59 -1.3 380,819 - AZOBR_RS31265 0.59 -0.5 380,819 - AZOBR_RS31265 0.59 +0.3 380,819 - AZOBR_RS31265 0.59 -0.7 381,040 + AZOBR_RS31265 0.77 -0.8 381,085 + AZOBR_RS31265 0.81 +0.4 381,085 + AZOBR_RS31265 0.81 +0.2 381,086 - AZOBR_RS31265 0.81 -0.1 381,086 - AZOBR_RS31265 0.81 -0.4 381,175 + AZOBR_RS31265 0.89 +0.2 381,176 - AZOBR_RS31265 0.89 +0.2 381,178 + AZOBR_RS31265 0.89 -0.1 381,178 + AZOBR_RS31265 0.89 +0.1 381,256 + -0.3 381,256 + -0.5 381,256 + -0.5 381,256 + -0.6 381,256 + +0.1 381,256 + +0.1 381,257 - +0.7 381,257 - +0.1 381,257 - -0.8 381,257 - +0.6 381,257 - -0.9 381,589 - -1.2 381,693 + AZOBR_RS31270 0.11 -0.0 381,694 - AZOBR_RS31270 0.11 -0.9 381,763 - AZOBR_RS31270 0.17 -1.0 381,822 + AZOBR_RS31270 0.23 -0.9 381,981 + AZOBR_RS31270 0.37 -0.3 381,981 + AZOBR_RS31270 0.37 +0.3 381,981 + AZOBR_RS31270 0.37 +0.9 381,982 - AZOBR_RS31270 0.38 -0.4 381,982 - AZOBR_RS31270 0.38 +0.4 381,982 - AZOBR_RS31270 0.38 -0.0 381,982 - AZOBR_RS31270 0.38 +0.0 382,335 + AZOBR_RS31270 0.70 +0.1 382,456 - AZOBR_RS31270 0.82 +0.5 382,456 - AZOBR_RS31270 0.82 -0.2 382,516 - AZOBR_RS31270 0.87 -0.7 382,516 - AZOBR_RS31270 0.87 -1.2 382,516 - AZOBR_RS31270 0.87 -0.9 382,573 + +0.0 382,573 + -0.2 382,573 + -0.1 382,614 + -0.3 382,615 - +0.1 382,931 + AZOBR_RS31275 0.16 +0.6 382,932 - AZOBR_RS31275 0.16 +0.3 382,932 - AZOBR_RS31275 0.16 -0.2 382,932 - AZOBR_RS31275 0.16 +0.2 383,120 + AZOBR_RS31275 0.28 -0.2 383,120 + AZOBR_RS31275 0.28 -1.0 383,120 + AZOBR_RS31275 0.28 +0.2 383,120 + AZOBR_RS31275 0.28 -0.3 383,121 - AZOBR_RS31275 0.28 +0.2 383,379 - AZOBR_RS31275 0.45 +0.8 383,420 + AZOBR_RS31275 0.48 +0.2
Or see this region's nucleotide sequence