Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01650 and AZOBR_RS01655 are separated by 22 nucleotides AZOBR_RS01655 and AZOBR_RS01660 are separated by 390 nucleotides
AZOBR_RS01650: AZOBR_RS01650 - ATP-dependent protease, at 338,643 to 339,980
_RS01650
AZOBR_RS01655: AZOBR_RS01655 - peptidase, at 340,003 to 340,551
_RS01655
AZOBR_RS01660: AZOBR_RS01660 - hypothetical protein, at 340,942 to 342,207
_RS01660
Position (kb) 340
341 Strain fitness (log2 ratio) -1
0
1 at 339.178 kb on + strand, within AZOBR_RS01650 at 339.178 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.314 kb on - strand, within AZOBR_RS01650 at 339.314 kb on - strand, within AZOBR_RS01650 at 339.682 kb on + strand, within AZOBR_RS01650 at 339.907 kb on + strand at 340.136 kb on + strand, within AZOBR_RS01655 at 340.565 kb on + strand at 340.565 kb on + strand at 340.566 kb on - strand at 340.566 kb on - strand at 340.566 kb on - strand at 340.615 kb on + strand at 340.615 kb on + strand at 340.615 kb on + strand at 340.616 kb on - strand at 340.616 kb on - strand at 340.616 kb on - strand at 340.616 kb on - strand at 340.616 kb on - strand at 340.616 kb on - strand at 340.637 kb on + strand at 340.637 kb on + strand at 340.637 kb on + strand at 341.274 kb on - strand, within AZOBR_RS01660
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 339,178 + AZOBR_RS01650 0.40 -0.1 339,178 + AZOBR_RS01650 0.40 -0.9 339,313 + AZOBR_RS01650 0.50 +0.2 339,313 + AZOBR_RS01650 0.50 -0.0 339,313 + AZOBR_RS01650 0.50 -0.1 339,313 + AZOBR_RS01650 0.50 -0.6 339,314 - AZOBR_RS01650 0.50 -0.5 339,314 - AZOBR_RS01650 0.50 -0.3 339,682 + AZOBR_RS01650 0.78 +0.3 339,907 + -0.4 340,136 + AZOBR_RS01655 0.24 +0.7 340,565 + +0.5 340,565 + +0.3 340,566 - -0.3 340,566 - -0.0 340,566 - +0.4 340,615 + -0.2 340,615 + +0.7 340,615 + +0.9 340,616 - -0.0 340,616 - +0.1 340,616 - -0.9 340,616 - -0.5 340,616 - +0.7 340,616 - -0.3 340,637 + -0.6 340,637 + -0.1 340,637 + -1.6 341,274 - AZOBR_RS01660 0.26 -0.0
Or see this region's nucleotide sequence