Strain Fitness in Shewanella loihica PV-4 around Shew_3174

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,777,773	+		Shew_3173	0.58	-0.3
3,777,773	+		Shew_3173	0.58	+0.3
3,777,774	-		Shew_3173	0.58	-1.2
3,777,886	-		Shew_3173	0.65	+0.3
3,777,939	-		Shew_3173	0.69	-0.5
3,777,959	-		Shew_3173	0.70	+0.1
3,778,020	+		Shew_3173	0.75	-0.2
3,778,020	+		Shew_3173	0.75	-0.0
3,778,028	-		Shew_3173	0.75	-0.1
3,778,092	+		Shew_3173	0.79	+1.0
3,778,100	-		Shew_3173	0.80	-1.2
3,778,100	-		Shew_3173	0.80	+0.4
3,778,100	-		Shew_3173	0.80	+0.2
3,778,110	-		Shew_3173	0.81	+0.2
3,778,110	-		Shew_3173	0.81	+0.1
3,778,202	-		Shew_3173	0.87	-0.4
3,778,259	+				-0.6
3,778,375	+				-0.1
3,778,691	-		Shew_3174	0.16	-1.8
3,778,869	+		Shew_3174	0.34	+0.2
3,778,869	-		Shew_3174	0.34	-0.0
3,779,036	-		Shew_3174	0.52	-0.7
3,779,170	+		Shew_3174	0.66	+0.1
3,779,454	+				+0.3
3,779,495	+				+1.3
3,779,503	-				+1.0
3,779,503	-				+0.4
3,779,503	-				-0.7
3,779,532	-				+0.4
3,779,790	+				+0.5
3,780,422	-		Shew_3175	0.58	+0.5
3,780,436	-		Shew_3175	0.59	+0.4
3,780,436	-		Shew_3175	0.59	+0.6