Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2916 and Shew_2917 are separated by 99 nucleotides Shew_2917 and Shew_2918 are separated by 12 nucleotides Shew_2918 and Shew_R0093 are separated by 221 nucleotides Shew_R0093 and Shew_R0094 are separated by 54 nucleotides Shew_R0094 and Shew_R0095 are separated by 45 nucleotides Shew_R0095 and Shew_R0096 are separated by 132 nucleotides Shew_R0096 and Shew_R0097 are separated by 20 nucleotides Shew_R0097 and Shew_R0098 are separated by 25 nucleotides
Shew_2916: Shew_2916 - ribose-phosphate pyrophosphokinase (RefSeq), at 3,454,282 to 3,455,256
_2916
Shew_2917: Shew_2917 - hypothetical protein (RefSeq), at 3,455,356 to 3,455,763
_2917
Shew_2918: Shew_2918 - hypothetical protein (RefSeq), at 3,455,776 to 3,456,282
_2918
Shew_R0093: Shew_R0093 - tRNA-Leu (RefSeq), at 3,456,504 to 3,456,588
_R0093
Shew_R0094: Shew_R0094 - tRNA-Gln (RefSeq), at 3,456,643 to 3,456,717
_R0094
Shew_R0095: Shew_R0095 - tRNA-Leu (RefSeq), at 3,456,763 to 3,456,847
_R0095
Shew_R0096: Shew_R0096 - tRNA-Met (RefSeq), at 3,456,980 to 3,457,056
_R0096
Shew_R0097: Shew_R0097 - tRNA-Gln (RefSeq), at 3,457,077 to 3,457,151
_R0097
Shew_R0098: Shew_R0098 - tRNA-Gln (RefSeq), at 3,457,177 to 3,457,251
_R0098
Position (kb)
3455
3456
3457 Strain fitness (log2 ratio)
-1
0
1 at 3455.518 kb on + strand, within Shew_2917 at 3456.012 kb on - strand, within Shew_2918
Per-strain Table
Or see this region's nucleotide sequence