Strain Fitness in Shewanella loihica PV-4 around Shew_2609
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,074,545 | + | Shew_2608 | 0.14 | -0.6 | |
3,074,718 | - | Shew_2608 | 0.30 | +1.6 | |
3,075,007 | - | Shew_2608 | 0.57 | -0.1 | |
3,075,344 | + | Shew_2608 | 0.89 | -0.1 | |
3,075,421 | - | +1.0 | |||
3,075,524 | + | +0.4 | |||
3,075,611 | + | +0.7 | |||
3,075,763 | + | Shew_2609 | 0.27 | -1.9 | |
3,076,118 | - | Shew_2609 | 0.66 | -0.3 | |
3,076,343 | + | +0.7 | |||
3,076,513 | - | +0.8 | |||
3,077,239 | + | Shew_2610 | 0.42 | -0.6 | |
3,077,384 | + | Shew_2610 | 0.49 | +0.5 |
Or see this region's nucleotide sequence