Strain Fitness in Shewanella loihica PV-4 around Shew_2582
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,044,675 | - | Shew_2581 | 0.62 | +0.5 | |
3,044,977 | - | Shew_2581 | 0.77 | +0.9 | |
3,045,067 | - | Shew_2581 | 0.81 | +0.7 | |
3,045,067 | - | Shew_2581 | 0.81 | +0.0 | |
3,045,385 | + | -1.6 | |||
3,045,387 | + | +0.6 | |||
3,045,457 | + | +0.0 | |||
3,045,592 | - | +0.5 | |||
3,045,790 | + | Shew_2582 | 0.13 | +0.5 | |
3,045,839 | + | Shew_2582 | 0.16 | +0.3 | |
3,046,856 | + | Shew_2582 | 0.81 | +1.4 | |
3,046,964 | - | Shew_2582 | 0.88 | +0.6 | |
3,047,044 | + | +0.1 | |||
3,047,138 | + | +0.2 |
Or see this region's nucleotide sequence