Strain Fitness in Shewanella loihica PV-4 around Shew_2253
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,631,381 | - | Shew_2251 | 0.79 | -0.0 | |
2,631,381 | - | Shew_2251 | 0.79 | +0.7 | |
2,632,130 | + | Shew_2252 | 0.70 | -1.8 | |
2,632,578 | + | Shew_2253 | 0.25 | +0.7 | |
2,632,642 | + | Shew_2253 | 0.31 | +0.8 | |
2,632,692 | - | Shew_2253 | 0.36 | +0.9 | |
2,633,268 | + | +0.6 | |||
2,633,680 | + | Shew_2254 | 0.22 | -0.9 | |
2,634,032 | - | Shew_2254 | 0.46 | +0.2 | |
2,634,164 | - | Shew_2254 | 0.55 | -0.2 |
Or see this region's nucleotide sequence