Strain Fitness in Shewanella loihica PV-4 around Shew_2061
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,379,908 | + | Shew_2060 | 0.48 | -2.0 | |
| 2,381,019 | + | Shew_2061 | 0.63 | +1.5 | |
| 2,381,118 | + | Shew_2061 | 0.78 | +2.5 | |
| 2,381,331 | - | +0.9 | |||
| 2,381,663 | + | Shew_2062 | 0.31 | +0.3 | |
| 2,381,730 | + | Shew_2062 | 0.41 | -0.9 | |
| 2,381,978 | + | Shew_2062 | 0.77 | -2.5 | |
| 2,382,216 | - | Shew_2063 | 0.15 | -1.2 |
Or see this region's nucleotide sequence