Strain Fitness in Shewanella loihica PV-4 around Shew_1642

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,878,841	+				+0.1
1,878,841	+				+0.3
1,879,311	-				+1.4
1,879,417	+				-0.4
1,879,489	+				-0.1
1,879,605	-				-0.4
1,879,620	+				-0.6
1,879,918	+		Shew_1642	0.18	+0.1
1,880,116	-		Shew_1642	0.25	-2.0
1,880,123	+		Shew_1642	0.25	+1.7
1,880,123	+		Shew_1642	0.25	-2.1
1,880,163	+		Shew_1642	0.26	+0.1
1,880,171	-		Shew_1642	0.26	+0.9
1,880,982	-		Shew_1642	0.53	-0.2
1,881,052	-		Shew_1642	0.55	-1.1
1,881,581	-		Shew_1642	0.72	+0.4
1,881,638	+		Shew_1642	0.74	-0.1
1,881,646	-		Shew_1642	0.74	+0.7
1,881,646	-		Shew_1642	0.74	-0.1
1,881,717	-		Shew_1642	0.77	+0.1
1,882,082	-		Shew_1642	0.89	-0.3
1,882,170	-				-0.6
1,882,726	+				+0.5