Strain Fitness in Shewanella loihica PV-4 around Shew_1250

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,447,400	-		Shew_1249	0.66	+0.3
1,447,404	+		Shew_1249	0.67	+0.2
1,447,419	-		Shew_1249	0.68	+1.1
1,447,797	+				+0.2
1,447,958	+				+2.4
1,448,029	-				-0.5
1,448,236	+				-0.5
1,448,401	+		Shew_1250	0.26	-1.8
1,448,409	-		Shew_1250	0.27	+0.2
1,448,442	+		Shew_1250	0.32	-0.2
1,448,563	-		Shew_1250	0.50	+1.8
1,448,570	-		Shew_1250	0.51	+0.9
1,448,615	-		Shew_1250	0.57	+1.2
1,448,642	+		Shew_1250	0.61	+0.4
1,448,700	-		Shew_1250	0.70	+0.7
1,448,762	-		Shew_1250	0.79	+0.5
1,448,821	+		Shew_1250	0.87	-0.0
1,448,821	+		Shew_1250	0.87	+1.3
1,449,101	-				+0.5
1,449,148	-				+2.0
1,449,174	+		Shew_1251	0.10	+1.2
1,449,264	+		Shew_1251	0.16	-0.5
1,449,311	-		Shew_1251	0.20	-0.1
1,449,373	-		Shew_1251	0.24	-0.3
1,449,373	-		Shew_1251	0.24	+2.0
1,449,520	+		Shew_1251	0.34	-0.8
1,449,527	+		Shew_1251	0.34	+0.8
1,449,728	+		Shew_1251	0.48	+0.5
1,449,728	+		Shew_1251	0.48	-1.0
1,449,728	+		Shew_1251	0.48	+0.3
1,449,836	+		Shew_1251	0.55	+1.5
1,449,836	+		Shew_1251	0.55	-0.3
1,449,844	-		Shew_1251	0.56	-0.2
1,449,844	-		Shew_1251	0.56	-0.7
1,449,844	-		Shew_1251	0.56	-0.3
1,449,880	+		Shew_1251	0.58	+1.3
1,449,893	-		Shew_1251	0.59	-1.9