Strain Fitness in Shewanella loihica PV-4 around Shew_1181

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,369,826	+		Shew_1179	0.87	+0.0
1,369,975	-				+0.1
1,369,975	-				-0.2
1,370,023	-				+0.3
1,370,062	-				-0.7
1,370,151	+				+0.6
1,370,426	+		Shew_1180	0.17	+0.2
1,370,478	-		Shew_1180	0.34	-0.1
1,370,507	+		Shew_1180	0.43	+1.5
1,370,582	+		Shew_1180	0.67	+0.3
1,370,590	-		Shew_1180	0.70	-2.2
1,370,648	-		Shew_1180	0.88	-0.3
1,370,648	-		Shew_1180	0.88	+0.1
1,371,430	-		Shew_1181	0.55	-0.2
1,371,552	+		Shew_1181	0.66	+2.3
1,371,585	-		Shew_1181	0.69	+0.6
1,371,975	+				-0.1
1,371,983	-				-0.5
1,372,137	+				+0.9
1,372,515	-		Shew_1182	0.14	-0.1
1,372,527	+		Shew_1182	0.15	+0.3
1,372,652	+		Shew_1182	0.27	-0.5
1,372,660	-		Shew_1182	0.27	+0.2
1,372,660	-		Shew_1182	0.27	+0.7