Strain Fitness in Shewanella loihica PV-4 around Shew_1115

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,287,007	-				+0.9
1,287,168	-				-0.0
1,287,274	+				+0.5
1,287,395	+				-0.9
1,287,397	+				-0.5
1,287,397	+				-0.3
1,287,402	+				+0.0
1,287,405	-				+0.1
1,287,410	-				+1.7
1,287,787	+				+0.3
1,287,935	+				-1.5
1,287,935	+				+0.4
1,287,953	-				+0.5
1,288,256	-		Shew_1115	0.13	+0.3
1,288,377	-		Shew_1115	0.18	+0.4
1,288,410	+		Shew_1115	0.19	+1.2
1,288,521	+		Shew_1115	0.23	+0.0
1,288,777	-		Shew_1115	0.33	+0.3
1,288,838	+		Shew_1115	0.35	+0.0
1,289,213	-		Shew_1115	0.49	-0.9
1,289,535	-		Shew_1115	0.61	-2.2
1,289,614	+		Shew_1115	0.64	-3.5
1,289,850	-		Shew_1115	0.73	-0.4
1,289,935	-		Shew_1115	0.76	+0.1
1,289,944	+		Shew_1115	0.77	-0.5
1,290,245	-		Shew_1115	0.88	-0.3
1,290,322	-				-0.1
1,290,424	-				+0.5
1,290,507	+				+0.2
1,291,329	-		Shew_1116	0.50	+0.2
1,291,329	-		Shew_1116	0.50	+0.6
1,291,343	-		Shew_1116	0.52	+1.1
1,291,532	-		Shew_1116	0.73	-0.8