Strain Fitness in Shewanella loihica PV-4 around Shew_0125

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
134,117	-		Shew_0124	0.42	+0.6
134,408	-		Shew_0124	0.61	+0.0
134,519	-		Shew_0124	0.67	-0.0
134,519	-		Shew_0124	0.67	+0.2
134,867	-		Shew_0124	0.89	+0.3
134,993	-				+0.9
135,104	-				-0.3
135,176	-				-0.5
135,194	-				+0.2
135,194	-				+0.5
135,368	+		Shew_0125	0.20	+0.9
135,810	+		Shew_0125	0.48	-2.5
135,818	-		Shew_0125	0.49	+0.2
135,989	+		Shew_0125	0.60	-0.6
136,060	+		Shew_0125	0.64	-0.5
136,142	+		Shew_0125	0.70	-0.1
136,164	+		Shew_0125	0.71	-0.6
136,197	+		Shew_0125	0.73	-0.6
136,373	-		Shew_0125	0.84	+0.5
136,407	+		Shew_0125	0.86	+0.3
136,447	+		Shew_0125	0.89	-1.5
136,668	-				-0.1
137,151	+		Shew_0126	0.26	-0.2
137,379	+		Shew_0126	0.71	-0.2
137,415	+		Shew_0126	0.78	-1.2
137,423	-		Shew_0126	0.80	-1.5
137,551	+				-1.9