Strain Fitness in Shewanella loihica PV-4 around Shew_0104
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
113,001 | - | Shew_0103 | 0.67 | +0.5 | |
113,193 | - | Shew_0103 | 0.82 | -2.1 | |
113,321 | - | +1.1 | |||
113,688 | + | -0.0 | |||
113,698 | - | +0.2 | |||
113,821 | + | +0.1 | |||
113,936 | - | +0.1 | |||
114,073 | - | Shew_0105 | 0.11 | +0.5 | |
114,378 | + | Shew_0105 | 0.23 | -1.2 | |
114,535 | + | Shew_0105 | 0.29 | -0.1 | |
114,543 | - | Shew_0105 | 0.30 | +0.3 | |
114,664 | - | Shew_0105 | 0.35 | +1.1 | |
114,679 | - | Shew_0105 | 0.35 | +0.2 |
Or see this region's nucleotide sequence