Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5983

Experiment: L-Isoleucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5982 and Pf6N2E2_5983 are separated by 483 nucleotidesPf6N2E2_5983 and Pf6N2E2_5984 are separated by 2 nucleotides Pf6N2E2_5982 - Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1), at 6,800,276 to 6,801,940 _5982 Pf6N2E2_5983 - Electron transfer flavoprotein, beta subunit, at 6,802,424 to 6,803,236 _5983 Pf6N2E2_5984 - Electron transfer flavoprotein, alpha subunit, at 6,803,239 to 6,804,168 _5984 Position (kb) 6802 6803 6804Strain fitness (log2 ratio) -1 0 1 2 3at 6801.954 kb on - strandat 6801.954 kb on - strandat 6802.071 kb on - strandat 6802.071 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.073 kb on - strandat 6802.097 kb on + strandat 6802.098 kb on - strandat 6802.131 kb on + strandat 6802.145 kb on - strandat 6802.145 kb on - strandat 6802.151 kb on + strandat 6802.152 kb on - strandat 6802.152 kb on - strandat 6802.201 kb on + strandat 6802.311 kb on + strandat 6802.405 kb on + strandat 6804.166 kb on + strandat 6804.166 kb on + strandat 6804.167 kb on - strandat 6804.184 kb on + strandat 6804.184 kb on + strandat 6804.184 kb on + strandat 6804.184 kb on + strandat 6804.184 kb on + strandat 6804.184 kb on + strandat 6804.185 kb on - strandat 6804.185 kb on - strandat 6804.186 kb on + strandat 6804.186 kb on + strandat 6804.186 kb on + strandat 6804.187 kb on - strandat 6804.187 kb on - strandat 6804.187 kb on - strandat 6804.187 kb on - strandat 6804.187 kb on - strandat 6804.187 kb on - strandat 6804.216 kb on + strandat 6804.217 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (C)
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6,801,954 - +0.5
6,801,954 - +0.0
6,802,071 - +1.6
6,802,071 - +0.4
6,802,073 - +0.5
6,802,073 - -0.0
6,802,073 - +0.5
6,802,073 - -0.5
6,802,073 - +0.7
6,802,073 - +0.4
6,802,073 - +0.4
6,802,097 + -0.7
6,802,098 - +1.1
6,802,131 + +0.0
6,802,145 - -0.1
6,802,145 - +0.2
6,802,151 + -0.5
6,802,152 - +0.0
6,802,152 - +0.6
6,802,201 + -0.3
6,802,311 + -0.1
6,802,405 + +0.0
6,804,166 + -0.5
6,804,166 + -0.3
6,804,167 - -0.0
6,804,184 + -0.1
6,804,184 + -0.5
6,804,184 + +0.5
6,804,184 + -0.3
6,804,184 + +0.5
6,804,184 + +0.1
6,804,185 - +0.6
6,804,185 - +0.1
6,804,186 + +1.1
6,804,186 + -0.2
6,804,186 + -0.1
6,804,187 - +0.9
6,804,187 - +2.9
6,804,187 - -0.1
6,804,187 - +0.3
6,804,187 - -0.5
6,804,187 - -0.3
6,804,216 + -0.9
6,804,217 - +1.3

Or see this region's nucleotide sequence