Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24395

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
5,938,890	-		CA265_RS24390	0.88	-0.8
5,938,890	-		CA265_RS24390	0.88	+0.5
5,938,909	+		CA265_RS24390	0.89	-1.0
5,938,909	+		CA265_RS24390	0.89	-1.7
5,938,910	-		CA265_RS24390	0.89	-0.5
5,938,910	-		CA265_RS24390	0.89	-0.7
5,939,026	+				-1.7
5,939,027	-				-2.0
5,939,040	+				-1.0
5,939,040	+				-1.6
5,939,048	+				-0.5
5,939,106	-				-1.6
5,939,110	-				-0.6
5,939,111	+				-1.4
5,939,115	+				+0.5
5,939,128	+				-2.0
5,939,133	-				-1.4
5,939,135	+				-0.9
5,939,153	+				+0.9
5,939,176	-				+0.0
5,939,178	-				+0.2
5,939,206	-				-0.2
5,939,259	-				+0.3
5,939,346	+				+0.9
5,939,360	-				-1.0
5,939,360	-				-0.4
5,939,522	+				+0.5
5,939,523	-				-2.0
5,939,616	+				-0.7
5,939,617	-				-1.2
5,939,617	-				+0.3
5,939,617	-				+0.0
5,939,617	-				-0.5
5,939,660	-				-0.1
5,939,741	+				-0.6
5,939,769	+				+0.2
5,939,783	+				-0.5
5,939,789	-				-0.3
5,939,795	-				+0.6
5,939,864	+				-0.4
5,939,880	-		CA265_RS24395	0.12	-1.0
5,939,912	-		CA265_RS24395	0.17	-0.9
5,939,942	+		CA265_RS24395	0.22	-1.4
5,939,968	+		CA265_RS24395	0.27	-0.9
5,939,984	+		CA265_RS24395	0.30	-0.2
5,939,985	-		CA265_RS24395	0.30	+0.1
5,940,103	+		CA265_RS24395	0.51	-0.1
5,940,104	-		CA265_RS24395	0.51	+0.5
5,940,104	-		CA265_RS24395	0.51	-0.6
5,940,114	+		CA265_RS24395	0.53	-0.4
5,940,115	-		CA265_RS24395	0.53	-0.3
5,940,115	-		CA265_RS24395	0.53	-0.4
5,940,181	+		CA265_RS24395	0.64	-1.2
5,940,181	+		CA265_RS24395	0.64	-1.0
5,940,247	+		CA265_RS24395	0.76	-0.1
5,940,248	-		CA265_RS24395	0.76	+0.4
5,940,248	-		CA265_RS24395	0.76	-0.6
5,940,276	-		CA265_RS24395	0.81	-0.3
5,940,455	+				-0.4
5,940,467	-				+1.6
5,940,472	+				-0.3
5,940,473	-				-2.2
5,940,473	-				+0.4
5,940,473	-				-0.3
5,940,478	-				-0.3
5,940,551	+				-0.4
5,940,603	-				-1.0
5,940,603	-				-0.4
5,940,697	-		CA265_RS24400	0.16	+0.1
5,940,862	-		CA265_RS24400	0.34	+0.7
5,940,894	+		CA265_RS24400	0.38	+1.3
5,940,942	+		CA265_RS24400	0.43	-0.7
5,940,943	-		CA265_RS24400	0.43	-0.1
5,940,943	-		CA265_RS24400	0.43	+0.9
5,940,961	+		CA265_RS24400	0.45	-0.9
5,940,965	+		CA265_RS24400	0.46	-0.4
5,941,029	+		CA265_RS24400	0.53	+0.8
5,941,029	+		CA265_RS24400	0.53	+1.9
5,941,032	+		CA265_RS24400	0.53	+0.5
5,941,045	-		CA265_RS24400	0.55	+0.1
5,941,068	+		CA265_RS24400	0.57	-0.5
5,941,068	+		CA265_RS24400	0.57	-0.2
5,941,069	-		CA265_RS24400	0.58	-0.4
5,941,136	-		CA265_RS24400	0.65	-0.7
5,941,267	-		CA265_RS24400	0.80	-0.2
5,941,299	+				+0.6
5,941,354	+		CA265_RS24400	0.90	+0.2
5,941,355	-		CA265_RS24400	0.90	+0.3