Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21515

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
5,297,623	-		CA265_RS21505	0.82	-2.5
5,297,639	-		CA265_RS21505	0.83	-2.9
5,297,657	+		CA265_RS21505	0.84	-2.4
5,297,684	-		CA265_RS21505	0.86	-2.3
5,297,756	+				-1.0
5,297,759	-				-1.8
5,297,780	+				-2.3
5,297,780	+				-1.6
5,297,780	+				-3.9
5,297,781	-				-2.0
5,297,781	-				-2.9
5,297,798	-				-3.4
5,297,802	-				-1.1
5,297,900	+				+1.0
5,297,918	-				-0.2
5,297,921	-				+0.1
5,297,968	+				+1.0
5,297,971	-				+0.7
5,298,017	+				+0.2
5,298,018	-				-0.8
5,298,019	+				+1.0
5,298,020	-				-1.0
5,298,041	+				+0.7
5,298,042	-				-1.5
5,298,060	+				+0.2
5,298,484	+				-0.3
5,298,487	-				+0.8
5,298,595	-				-0.7
5,298,597	-				-1.9
5,298,614	+				-1.0
5,298,663	-				-0.0
5,298,664	+				-1.4
5,298,665	-				-1.4
5,298,665	-				-1.4
5,298,675	-				-2.5
5,298,707	+		CA265_RS21515	0.12	+1.8
5,298,864	+		CA265_RS21515	0.25	+0.3
5,299,037	+		CA265_RS21515	0.39	-0.1
5,299,038	-		CA265_RS21515	0.39	-2.7
5,299,111	-		CA265_RS21515	0.45	-1.5
5,299,134	-		CA265_RS21515	0.47	-0.5
5,299,254	+		CA265_RS21515	0.56	-1.2
5,299,304	+		CA265_RS21515	0.60	-0.9
5,299,305	-		CA265_RS21515	0.61	-2.0
5,299,326	+		CA265_RS21515	0.62	-1.9
5,299,327	-		CA265_RS21515	0.62	-1.4
5,299,338	+		CA265_RS21515	0.63	-3.1
5,299,351	-		CA265_RS21515	0.64	-2.0
5,299,362	-		CA265_RS21515	0.65	-1.2
5,299,362	-		CA265_RS21515	0.65	-2.6
5,299,405	-		CA265_RS21515	0.69	-1.9
5,299,405	-		CA265_RS21515	0.69	-1.3
5,299,409	+		CA265_RS21515	0.69	-1.0
5,299,451	+		CA265_RS21515	0.72	-1.0
5,299,460	+		CA265_RS21515	0.73	-1.0
5,299,460	+		CA265_RS21515	0.73	-1.0
5,299,460	+		CA265_RS21515	0.73	-3.7
5,299,461	-		CA265_RS21515	0.73	-2.3
5,299,461	-		CA265_RS21515	0.73	-0.2
5,299,539	-		CA265_RS21515	0.80	-2.5
5,299,539	-		CA265_RS21515	0.80	-0.9
5,299,563	-		CA265_RS21515	0.82	-2.0
5,299,592	-		CA265_RS21515	0.84	-1.8
5,299,630	-		CA265_RS21515	0.87	-2.0
5,299,656	+		CA265_RS21515	0.89	-1.9
5,299,695	+				-1.0
5,299,695	+				-1.6
5,299,696	-				-2.3
5,299,700	-				-1.7
5,299,707	+				-0.7
5,299,713	+				-0.7
5,299,720	-				-2.3
5,299,740	+				-1.4
5,299,740	+				-2.2
5,299,753	-				-3.8
5,299,786	+				+0.5
5,299,787	-				-0.2
5,299,908	+				-1.1
5,299,908	+				-1.0
5,299,955	+		CA265_RS21520	0.13	+0.2
5,299,956	-		CA265_RS21520	0.13	-0.5
5,299,956	-		CA265_RS21520	0.13	+0.2
5,299,965	+		CA265_RS21520	0.15	+0.1
5,299,987	-		CA265_RS21520	0.18	-0.7
5,300,056	+		CA265_RS21520	0.28	-0.1
5,300,064	+		CA265_RS21520	0.29	-2.5
5,300,087	+		CA265_RS21520	0.33	-1.2
5,300,092	+		CA265_RS21520	0.33	+0.5
5,300,093	-		CA265_RS21520	0.33	-0.4
5,300,129	+		CA265_RS21520	0.39	+0.6
5,300,130	-		CA265_RS21520	0.39	+0.9
5,300,130	-		CA265_RS21520	0.39	-1.3
5,300,159	+		CA265_RS21520	0.43	+0.1
5,300,159	+		CA265_RS21520	0.43	+0.3
5,300,197	+		CA265_RS21520	0.49	-0.5
5,300,278	-		CA265_RS21520	0.61	+0.4
5,300,448	+		CA265_RS21520	0.85	-1.3
5,300,449	-		CA265_RS21520	0.86	+1.6
5,300,597	-				+0.9
5,300,635	-				+0.3
5,300,716	-		CA265_RS21525	0.17	-0.6