Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21415

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
5,279,530	-				+0.8
5,279,530	-				+0.1
5,279,602	+				-0.4
5,279,617	-				-1.3
5,279,692	+				-0.1
5,279,738	+				+0.1
5,279,739	-				+0.0
5,279,742	+				+0.4
5,279,742	+				+1.1
5,279,772	-		CA265_RS21410	0.14	+0.8
5,279,772	-		CA265_RS21410	0.14	-0.2
5,279,774	+		CA265_RS21410	0.14	-0.1
5,279,774	+		CA265_RS21410	0.14	-0.1
5,279,776	+		CA265_RS21410	0.15	+0.3
5,279,777	-		CA265_RS21410	0.15	-1.2
5,279,822	+		CA265_RS21410	0.23	-0.1
5,279,823	-		CA265_RS21410	0.23	-1.5
5,279,826	-		CA265_RS21410	0.24	-1.4
5,279,841	-		CA265_RS21410	0.26	+1.2
5,279,917	+		CA265_RS21410	0.39	+0.6
5,279,979	+		CA265_RS21410	0.50	-0.3
5,279,979	+		CA265_RS21410	0.50	-0.3
5,279,980	-		CA265_RS21410	0.50	+1.0
5,280,035	+		CA265_RS21410	0.60	-0.9
5,280,045	+		CA265_RS21410	0.62	+0.9
5,280,046	-		CA265_RS21410	0.62	+1.2
5,280,048	-		CA265_RS21410	0.62	+0.3
5,280,068	+		CA265_RS21410	0.66	-0.5
5,280,068	+		CA265_RS21410	0.66	+0.1
5,280,069	-		CA265_RS21410	0.66	+0.6
5,280,246	+				-0.4
5,280,282	+				+0.5
5,280,345	-				-0.7
5,280,348	+				-0.2
5,280,474	+				-0.2
5,280,504	+				-0.1
5,280,506	+				+0.7
5,280,536	-				+0.7
5,280,547	+				-0.2
5,280,643	+		CA265_RS21415	0.25	+0.6
5,280,655	-		CA265_RS21415	0.27	+0.8
5,280,753	+		CA265_RS21415	0.45	+0.2
5,280,754	-		CA265_RS21415	0.45	-0.7
5,280,754	-		CA265_RS21415	0.45	-0.3
5,280,754	-		CA265_RS21415	0.45	-1.0
5,280,832	+		CA265_RS21415	0.59	+0.2
5,280,833	-		CA265_RS21415	0.59	+0.6
5,280,914	+		CA265_RS21415	0.73	-0.1
5,280,978	-		CA265_RS21415	0.85	-0.9
5,281,037	+				-0.4
5,281,064	+				+0.2
5,281,110	+				-0.1
5,281,111	-				-0.0
5,281,118	+		CA265_RS21420	0.10	+1.4
5,281,118	+		CA265_RS21420	0.10	+1.3
5,281,228	-		CA265_RS21420	0.31	+0.5
5,281,239	-		CA265_RS21420	0.33	+0.6
5,281,273	-		CA265_RS21420	0.39	+0.6
5,281,276	-		CA265_RS21420	0.39	+0.6
5,281,332	+		CA265_RS21420	0.50	+0.2
5,281,337	-				-0.2
5,281,381	+		CA265_RS21420	0.59	-0.8
5,281,457	+		CA265_RS21420	0.73	-0.0
5,281,457	+		CA265_RS21420	0.73	+0.1
5,281,458	-		CA265_RS21420	0.73	+0.3
5,281,458	-		CA265_RS21420	0.73	-0.9
5,281,481	-		CA265_RS21420	0.77	-1.0
5,281,547	-		CA265_RS21420	0.90	-0.1
5,281,622	-				-0.6
5,281,696	+				+1.0
5,281,725	-				-1.2
5,281,748	-		CA265_RS21425	0.12	-2.3
5,281,769	+		CA265_RS21425	0.14	+0.1
5,281,845	+		CA265_RS21425	0.24	-1.7
5,281,846	-		CA265_RS21425	0.24	+0.4
5,281,851	+		CA265_RS21425	0.24	+0.4
5,281,852	-		CA265_RS21425	0.24	-0.8
5,281,855	+		CA265_RS21425	0.25	-0.6
5,281,857	+		CA265_RS21425	0.25	+0.2
5,281,857	+		CA265_RS21425	0.25	-0.7
5,281,858	-		CA265_RS21425	0.25	-2.9
5,281,877	+		CA265_RS21425	0.28	+0.0
5,281,894	-		CA265_RS21425	0.30	-0.4
5,281,955	+		CA265_RS21425	0.37	+0.4
5,281,980	-		CA265_RS21425	0.40	+0.2