Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17255

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
4,308,524	+		CA265_RS17250	0.48	-0.1
4,308,648	-		CA265_RS17250	0.55	-0.5
4,308,770	-		CA265_RS17250	0.62	-1.2
4,308,794	-		CA265_RS17250	0.63	+0.3
4,308,806	-		CA265_RS17250	0.64	-1.2
4,308,806	-		CA265_RS17250	0.64	+2.0
4,308,882	+		CA265_RS17250	0.68	+0.1
4,308,883	-		CA265_RS17250	0.69	-0.8
4,308,886	+		CA265_RS17250	0.69	-0.4
4,309,034	+		CA265_RS17250	0.77	+0.9
4,309,062	+		CA265_RS17250	0.79	-0.6
4,309,073	+		CA265_RS17250	0.79	-0.1
4,309,074	-		CA265_RS17250	0.79	-1.2
4,309,075	+		CA265_RS17250	0.80	-1.7
4,309,109	+				+0.6
4,309,175	-		CA265_RS17250	0.85	-0.3
4,309,175	-		CA265_RS17250	0.85	-0.3
4,309,212	+		CA265_RS17250	0.87	-0.5
4,309,262	+				+0.2
4,309,262	+				-0.2
4,309,262	+				-0.2
4,309,265	-				+0.5
4,309,265	-				+0.2
4,309,343	+				+0.0
4,309,406	+				-0.0
4,309,407	-				-1.3
4,309,409	-				+0.5
4,309,410	+				-0.3
4,309,411	-				+0.1
4,309,460	+				+0.1
4,309,469	+				+0.0
4,309,536	+				+0.3
4,309,536	+				-0.6
4,309,537	-				+0.2
4,309,554	+				+0.3
4,309,578	+				-0.3
4,309,630	-		CA265_RS17255	0.12	+0.7
4,309,685	+		CA265_RS17255	0.16	+0.4
4,309,686	-		CA265_RS17255	0.16	+0.3
4,309,703	+		CA265_RS17255	0.17	+0.3
4,309,703	+		CA265_RS17255	0.17	-1.4
4,309,761	+		CA265_RS17255	0.21	-0.2
4,309,762	-		CA265_RS17255	0.22	+0.6
4,309,770	+		CA265_RS17255	0.22	+0.3
4,309,822	-		CA265_RS17255	0.26	-0.2
4,309,822	-		CA265_RS17255	0.26	+0.7
4,309,840	+		CA265_RS17255	0.27	-0.2
4,309,840	+		CA265_RS17255	0.27	-0.5
4,309,917	+		CA265_RS17255	0.33	+0.7
4,309,917	+		CA265_RS17255	0.33	-2.1
4,309,918	-		CA265_RS17255	0.33	+0.3
4,309,951	+		CA265_RS17255	0.35	-0.9
4,309,952	-		CA265_RS17255	0.35	+0.3
4,309,952	-		CA265_RS17255	0.35	+0.4
4,309,973	+		CA265_RS17255	0.37	-0.0
4,310,024	-		CA265_RS17255	0.40	-0.5
4,310,164	-		CA265_RS17255	0.50	-0.3
4,310,169	+		CA265_RS17255	0.50	-0.2
4,310,243	-		CA265_RS17255	0.56	+0.8
4,310,246	+		CA265_RS17255	0.56	+1.0
4,310,268	-		CA265_RS17255	0.57	+1.3
4,310,291	-		CA265_RS17255	0.59	-0.5
4,310,312	+		CA265_RS17255	0.61	+0.4
4,310,313	-		CA265_RS17255	0.61	+1.1
4,310,437	-		CA265_RS17255	0.70	-0.1
4,310,485	+		CA265_RS17255	0.73	-0.1
4,310,519	-		CA265_RS17255	0.75	+0.4
4,310,610	+		CA265_RS17255	0.82	-0.3
4,310,610	+		CA265_RS17255	0.82	+0.5
4,310,610	+		CA265_RS17255	0.82	+0.3
4,310,716	-		CA265_RS17255	0.89	-1.6
4,310,746	+				-0.8
4,310,746	+				-0.5
4,310,836	-				-0.2
4,310,836	-				+1.7
4,310,865	+				+0.3
4,310,869	+				+0.4
4,310,869	+				-0.3
4,310,948	-				+0.1
4,310,982	-				-0.6
4,310,982	-				-0.8
4,311,126	+		CA265_RS17260	0.11	+0.5
4,311,127	-		CA265_RS17260	0.11	-1.8
4,311,127	-		CA265_RS17260	0.11	-0.5
4,311,187	-		CA265_RS17260	0.15	+0.8
4,311,218	-		CA265_RS17260	0.17	+0.2
4,311,276	+		CA265_RS17260	0.21	-1.1
4,311,281	-		CA265_RS17260	0.21	+0.2
4,311,285	-		CA265_RS17260	0.21	-0.4
4,311,285	-		CA265_RS17260	0.21	-0.9
4,311,305	-		CA265_RS17260	0.23	-0.9
4,311,357	+		CA265_RS17260	0.26	-0.5
4,311,368	-		CA265_RS17260	0.27	+0.3
4,311,382	+		CA265_RS17260	0.28	-0.6
4,311,383	-		CA265_RS17260	0.28	-2.7
4,311,503	+		CA265_RS17260	0.36	-0.1
4,311,504	-		CA265_RS17260	0.36	+0.8
4,311,507	+		CA265_RS17260	0.36	-0.2
4,311,518	+		CA265_RS17260	0.37	-0.8
4,311,639	-		CA265_RS17260	0.45	-0.7
4,311,639	-		CA265_RS17260	0.45	-0.0
4,311,680	+		CA265_RS17260	0.47	-0.5
4,311,717	-		CA265_RS17260	0.50	+0.2
4,311,814	-		CA265_RS17260	0.56	-0.6
4,311,829	-		CA265_RS17260	0.57	-0.3