Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11755

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
2,912,395	+				-1.2
2,912,395	+				-0.6
2,912,399	+				-0.3
2,912,458	-				-1.5
2,912,460	+				-0.0
2,912,461	-				-2.1
2,912,604	+		CA265_RS11750	0.14	-0.1
2,912,621	+		CA265_RS11750	0.16	-0.5
2,912,621	+		CA265_RS11750	0.16	-0.7
2,912,695	+		CA265_RS11750	0.25	-0.9
2,912,926	+		CA265_RS11750	0.54	+0.6
2,913,110	+		CA265_RS11750	0.76	+0.5
2,913,111	-		CA265_RS11750	0.77	-0.9
2,913,200	+		CA265_RS11750	0.88	-1.0
2,913,237	+				+0.0
2,913,299	+				-0.4
2,913,409	+				+1.6
2,913,409	+				-1.7
2,913,409	+				-0.3
2,913,450	+		CA265_RS11755	0.15	-0.2
2,913,450	+		CA265_RS11755	0.15	+0.1
2,913,549	+		CA265_RS11755	0.31	-1.2
2,913,549	+		CA265_RS11755	0.31	+0.6
2,913,570	+		CA265_RS11755	0.34	+0.3
2,913,573	+		CA265_RS11755	0.35	-1.0
2,913,627	+		CA265_RS11755	0.44	-0.6
2,913,665	+		CA265_RS11755	0.50	-0.4
2,913,665	+		CA265_RS11755	0.50	-0.2
2,913,666	-		CA265_RS11755	0.50	+0.7
2,913,679	+		CA265_RS11755	0.53	-0.7
2,913,881	+				+0.3
2,913,882	-				-1.5
2,913,916	-				-1.2
2,913,926	+				-0.5
2,913,926	+				-0.8
2,913,964	+				+0.1
2,913,984	+				-0.2
2,913,994	-				-0.5
2,914,172	+		CA265_RS11760	0.16	-0.6
2,914,173	-		CA265_RS11760	0.16	-1.3
2,914,178	+		CA265_RS11760	0.17	+0.0
2,914,178	+		CA265_RS11760	0.17	+0.3
2,914,306	+		CA265_RS11760	0.23	+0.9
2,914,306	+		CA265_RS11760	0.23	-0.1
2,914,354	-		CA265_RS11760	0.26	-2.6
2,914,399	-		CA265_RS11760	0.28	-2.7
2,914,410	-		CA265_RS11760	0.28	-1.2
2,914,413	+		CA265_RS11760	0.29	-0.1
2,914,812	-		CA265_RS11760	0.49	+0.1
2,914,815	-		CA265_RS11760	0.49	-1.5
2,914,815	-		CA265_RS11760	0.49	-2.3
2,914,961	+		CA265_RS11760	0.57	+0.1
2,914,961	+		CA265_RS11760	0.57	-2.3
2,914,961	+		CA265_RS11760	0.57	+0.3
2,914,963	+		CA265_RS11760	0.57	-0.3