Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09190

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
2,288,875	-				-0.4
2,289,830	-				+0.2
2,289,846	+				-2.1
2,289,847	-				-1.5
2,289,865	-				-1.7
2,289,912	-				-1.7
2,289,934	+				-1.3
2,289,973	+				-2.1
2,290,031	+		CA265_RS09190	0.10	+0.0
2,290,036	-		CA265_RS09190	0.11	-0.7
2,290,036	-		CA265_RS09190	0.11	-1.9
2,290,038	+		CA265_RS09190	0.11	-2.4
2,290,038	+		CA265_RS09190	0.11	-1.8
2,290,038	+		CA265_RS09190	0.11	-1.6
2,290,044	+		CA265_RS09190	0.11	-4.1
2,290,045	-		CA265_RS09190	0.11	-1.4
2,290,091	+		CA265_RS09190	0.14	-1.7
2,290,092	-		CA265_RS09190	0.14	-0.1
2,290,143	+		CA265_RS09190	0.17	-0.9
2,290,185	-		CA265_RS09190	0.19	-1.9
2,290,306	+		CA265_RS09190	0.26	+1.2
2,290,307	-		CA265_RS09190	0.26	-1.3
2,290,440	-		CA265_RS09190	0.33	-2.1
2,290,451	-		CA265_RS09190	0.34	-2.3
2,290,451	-		CA265_RS09190	0.34	-1.2
2,290,535	-		CA265_RS09190	0.39	+1.2
2,290,544	-		CA265_RS09190	0.39	-1.4
2,290,549	-		CA265_RS09190	0.39	-1.1
2,290,558	+		CA265_RS09190	0.40	-2.1
2,290,559	-		CA265_RS09190	0.40	-2.1
2,290,559	-		CA265_RS09190	0.40	-1.9
2,290,559	-		CA265_RS09190	0.40	-1.3
2,290,561	+		CA265_RS09190	0.40	-1.0
2,290,591	-		CA265_RS09190	0.42	-0.6
2,290,624	+		CA265_RS09190	0.44	-1.8
2,290,625	-		CA265_RS09190	0.44	-1.4
2,290,625	-		CA265_RS09190	0.44	-1.6
2,290,657	+				-0.4
2,290,690	+		CA265_RS09190	0.47	-2.6
2,290,708	+		CA265_RS09190	0.48	-1.6
2,290,710	+		CA265_RS09190	0.48	-3.0
2,290,724	+		CA265_RS09190	0.49	-1.4
2,290,725	-		CA265_RS09190	0.49	-0.8
2,290,725	-		CA265_RS09190	0.49	-1.1
2,290,728	-		CA265_RS09190	0.49	-0.6
2,290,791	+		CA265_RS09190	0.53	-1.9
2,290,791	+		CA265_RS09190	0.53	-2.1
2,290,791	+		CA265_RS09190	0.53	-1.1
2,290,792	-		CA265_RS09190	0.53	-2.5
2,290,824	-		CA265_RS09190	0.55	-2.6
2,290,861	+		CA265_RS09190	0.57	-1.4
2,290,862	-		CA265_RS09190	0.57	-0.8
2,290,865	+		CA265_RS09190	0.57	-1.0
2,290,957	+		CA265_RS09190	0.62	-1.1
2,290,981	+		CA265_RS09190	0.64	-1.4
2,290,982	-		CA265_RS09190	0.64	-0.8
2,290,986	-		CA265_RS09190	0.64	-1.5
2,290,991	+		CA265_RS09190	0.64	-1.4
2,291,079	+		CA265_RS09190	0.69	-1.7
2,291,079	+		CA265_RS09190	0.69	+1.8
2,291,079	+		CA265_RS09190	0.69	-1.7
2,291,081	+		CA265_RS09190	0.69	-1.6
2,291,082	-		CA265_RS09190	0.69	-1.4
2,291,082	-		CA265_RS09190	0.69	-1.2
2,291,087	-		CA265_RS09190	0.69	-1.8
2,291,106	-		CA265_RS09190	0.71	-2.0
2,291,153	+		CA265_RS09190	0.73	-1.6
2,291,153	+		CA265_RS09190	0.73	-1.3
2,291,153	+		CA265_RS09190	0.73	-3.3
2,291,153	+		CA265_RS09190	0.73	-1.6
2,291,154	-		CA265_RS09190	0.73	-2.1
2,291,157	+		CA265_RS09190	0.73	-0.1
2,291,157	+		CA265_RS09190	0.73	-1.2
2,291,158	-		CA265_RS09190	0.73	-1.5
2,291,158	-		CA265_RS09190	0.73	-1.4
2,291,242	-		CA265_RS09190	0.78	-1.5
2,291,270	-		CA265_RS09190	0.80	-1.3
2,291,273	+		CA265_RS09190	0.80	-0.7
2,291,274	-		CA265_RS09190	0.80	-2.4
2,291,295	-		CA265_RS09190	0.81	-1.4
2,291,361	-		CA265_RS09190	0.85	-1.8
2,291,374	-		CA265_RS09190	0.85	-1.5
2,291,391	-		CA265_RS09190	0.86	-1.6
2,291,391	-		CA265_RS09190	0.86	-3.2
2,291,436	+		CA265_RS09190	0.89	-1.8
2,291,492	-				-1.2
2,291,492	-				-1.4
2,291,537	-				-0.9
2,291,537	-				-1.5
2,291,553	+				-2.3
2,291,554	-				-1.4
2,291,592	+				-2.2
2,291,592	+				-1.1
2,291,592	+				-1.1
2,291,593	-				-1.6
2,291,593	-				-0.4
2,291,594	-				-2.1
2,291,622	+				-0.8
2,291,623	-				-0.9
2,291,625	-				-1.1
2,291,625	-				-1.4
2,291,644	+				-0.6
2,291,644	+				-0.5
2,291,693	+				-0.3
2,291,694	-				-0.5
2,291,696	+				-0.4
2,291,704	+				-1.6
2,291,704	+				-0.7
2,291,744	-				-4.7
2,291,822	+				-4.5
2,291,823	-				-4.5
2,291,846	+		CA265_RS09195	0.10	-2.0
2,291,988	+		CA265_RS09195	0.20	-3.2
2,292,024	-		CA265_RS09195	0.23	-3.9
2,292,039	+		CA265_RS09195	0.24	-5.1
2,292,039	+		CA265_RS09195	0.24	-2.5
2,292,039	+		CA265_RS09195	0.24	-2.7
2,292,078	-		CA265_RS09195	0.27	-3.5
2,292,158	+		CA265_RS09195	0.32	-3.2
2,292,177	+		CA265_RS09195	0.34	-6.2
2,292,178	-		CA265_RS09195	0.34	-4.3
2,292,197	+		CA265_RS09195	0.35	+0.9
2,292,197	+		CA265_RS09195	0.35	-4.0
2,292,198	-		CA265_RS09195	0.35	-5.8
2,292,612	-		CA265_RS09195	0.65	-4.6