Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07140

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
1,780,812	+		CA265_RS07130	0.63	-0.1
1,780,812	+		CA265_RS07130	0.63	+0.3
1,780,813	-		CA265_RS07130	0.63	+0.1
1,780,941	-		CA265_RS07130	0.78	-0.0
1,780,941	-		CA265_RS07130	0.78	+0.2
1,780,983	+		CA265_RS07130	0.84	+0.8
1,781,055	-				+1.2
1,781,064	+				-0.6
1,781,064	+				-0.5
1,781,068	+				+0.9
1,781,068	+				-0.1
1,781,069	-				+0.9
1,781,069	-				+0.2
1,781,069	-				+0.3
1,781,096	+				+0.1
1,781,097	-				-1.3
1,781,110	+				+0.6
1,781,168	+				+0.1
1,781,186	+				-0.4
1,781,187	-				+0.4
1,781,191	+				+0.4
1,781,458	-		CA265_RS07135	0.66	+0.5
1,781,461	+		CA265_RS07135	0.66	+1.6
1,781,501	-		CA265_RS07135	0.75	-0.1
1,781,528	-		CA265_RS07135	0.81	+0.4
1,781,528	-		CA265_RS07135	0.81	+1.0
1,781,528	-		CA265_RS07135	0.81	+0.9
1,781,528	-		CA265_RS07135	0.81	-0.5
1,781,605	-				+0.9
1,781,699	-				-0.4
1,781,699	-				+0.2
1,781,801	-				+0.6
1,781,841	-				-0.9
1,781,856	-				-1.1
1,781,872	+				-1.6
1,781,880	-				-0.7
1,781,880	-				-1.2
1,781,880	-				-1.0
1,781,982	+		CA265_RS07140	0.16	-0.8
1,781,999	+		CA265_RS07140	0.18	-0.7
1,782,000	-		CA265_RS07140	0.18	-1.7
1,782,081	+		CA265_RS07140	0.24	-1.3
1,782,082	-		CA265_RS07140	0.24	+0.2
1,782,087	-		CA265_RS07140	0.25	-0.8
1,782,087	-		CA265_RS07140	0.25	-1.5
1,782,127	+		CA265_RS07140	0.28	+0.0
1,782,128	-		CA265_RS07140	0.28	+0.4
1,782,173	-		CA265_RS07140	0.32	-2.5
1,782,276	-		CA265_RS07140	0.40	-1.2
1,782,290	+		CA265_RS07140	0.41	-2.4
1,782,291	-		CA265_RS07140	0.41	-0.2
1,782,291	-		CA265_RS07140	0.41	-2.3
1,782,457	+		CA265_RS07140	0.55	-0.7
1,782,458	-		CA265_RS07140	0.55	-0.8
1,782,503	-		CA265_RS07140	0.59	-0.4
1,782,503	-		CA265_RS07140	0.59	-0.9
1,782,506	-		CA265_RS07140	0.59	+0.5
1,782,506	-		CA265_RS07140	0.59	-1.3
1,782,600	+		CA265_RS07140	0.66	-1.1
1,782,601	-		CA265_RS07140	0.67	+0.5
1,782,601	-		CA265_RS07140	0.67	-0.6
1,782,690	-		CA265_RS07140	0.74	-0.2
1,782,722	+		CA265_RS07140	0.76	-1.0
1,782,722	+		CA265_RS07140	0.76	-1.2
1,782,745	+		CA265_RS07140	0.78	-0.3
1,782,774	+		CA265_RS07140	0.81	-0.8
1,782,774	+		CA265_RS07140	0.81	-1.7
1,782,799	+		CA265_RS07140	0.83	+0.4
1,782,823	-		CA265_RS07140	0.85	-0.7
1,782,825	+		CA265_RS07140	0.85	-2.3
1,782,826	-		CA265_RS07140	0.85	-0.7
1,782,826	-		CA265_RS07140	0.85	-0.4
1,782,827	+		CA265_RS07140	0.85	-0.1
1,782,847	+		CA265_RS07140	0.86	-1.7
1,782,924	-				-0.7
1,782,924	-				-0.8
1,782,925	+				-0.5
1,782,925	+				-0.6
1,782,926	-				-0.4
1,782,958	-				-0.5
1,782,975	-				-0.7
1,783,061	+				-0.1
1,783,061	+				+0.4
1,783,152	+				+0.6
1,783,209	+				-0.8
1,783,209	+				-0.0
1,783,348	+				+0.2
1,783,387	+				-0.4
1,783,460	+				+0.2
1,783,464	+				+0.2
1,783,533	+				-0.5
1,783,537	+				-0.4
1,783,542	+				+0.2
1,783,564	-				+0.1
1,783,565	+				+0.1
1,783,640	+				-0.9
1,783,715	-				-0.0
1,783,794	+				+0.9
1,783,794	+				+0.4
1,783,794	+				+0.1
1,783,830	-				-0.4
1,783,911	+				-1.4
1,783,954	+				-0.3
1,783,967	+				+1.0
1,783,967	+				+1.2
1,784,001	+				-0.2